| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2932 |
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| Symbol | |
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| ID | 6976366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3211080 |
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| End bp | 3213059 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643392441 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_002277278 |
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| Protein GI | 209545049 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.310329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG AACTGGGCAA TTTCGCGCTG GCGCTGGCCT GCTGCCTGGC CGGCGGGCAG
GCGATCCTGC CGCTGGTGGG CGCGCGGCGG CGCGACCCGC GGCTGATGGC GCTGGCCCCC
GCCCTGGCGG TGGGGCAGAT GCTGGCGCTG GCCTTTTCCT TCGCATGCCT GATCGATGCG
GCGGTGCGTG ACGATTTCTC GGTCCAGAAC GTCGCGGCCA ACAGCGCCGC CGCCAAGCCG
CTGCTGTACA AAATCACCGG CGTATGGGGC AATCACGAGG GATCGGTACT GCTGTGGGCG
CTGATCCTGG GGATCTGCGG CGGGGCGGTG GCACTGTTCG GCCGCAACCT GCCCTCTGCC
CTGCGGGCGC GGGTCATCGC GGTCCTGGGC GGCGTTTCGG CCGGCTTCCA GCTGTTCTGC
CTGACGACGT CCAATCCGTT CGACCGCGTC TGGCCCGCGC CGATGGACGG CCAGGGCATG
AACCCGCTGC TGCAGGACCC GGGCCTGGCC TTCCATCCGC CCATTCTCTA CACCGGCTAT
GTCGGCTTCG CCGTGCCCTT CGCCTTCGCC GTCGCCGCCC TGATCGAGGG ACGGGTGGAC
GCCGCCTGGG GCCGCTGGGT CCGCCCCTGG GCCGTCGCGG CCTGGTGCTT CCTGACCTGC
GGCATCGCGC TGGGGTCGTG GTGGTCGTAC TACGTGCTGG GCTGGGGCGG CTACTGGTTC
TGGGACCCGG TGGAAAACGC GTCGCTGATC CCGTGGCTGA CCGGCACCGC GCTGGTCCAT
TCCGCCATCG TGGTGGAAAA GCGCGAGGCG CTGAAGATCT GGACCGTGCT GCTGGCCATC
GGCACATTCT CGTTCTCGCT GTCCGGCACG TTCCTGGTCC GCTCGGGCAT TCTCAATTCC
GTCCATGCCT TCGCCAACGA CCCGGCGCGC GGCATCTTCA TCCTGGGCCT GCTGGCGCTG
GTCATCGGCG GGTCGCTGCT GCTGTTCGCG ATCCGCGCGC CGGCGCTGGT GGCGGGCGGC
CTGTTCGCGC CGGTCTCGCG CGAGGGGCTG CTGGTCGTGA ACAATATCCT GCTGTGCTCG
ATCTGCGCGG TGGTGCTGAC CGGGACCATG TATCCGCCCT TCATGTCGCT GCTGTTCGGC
AAGACGATTT CGGTCGGCAA GCCGTTCTTC GACGCCACGG CGGCGCCGCT GGCGATTCCG
CTTCTGGCCT TCATGGGGTT CGGCCCGATG ATGCCGTGGA AGCGCGCCCA GTTCTGGCCC
GTGCTGCGCC GGCTGTGGTG GGCCGGGATC GTCACCGCCC TCGCCTTCTG CCTGATGGCC
TGGCGCATCC GCGACGTGCT GCCGCTGCTG GCCGCGACCG GCGCGGTCTG GGTGATCGCG
GCCAGCGTCG CCGACATTGC CGAGCGCGTC CGCCTGTTCC GCATCCCGCC CGGCGCCAGC
CTGCAGCGCG CGCGCATGCT GCCGCGCGCG GCGCTGGGCG CGGCCCTGGC CCATGCCGGC
GTCGGCATCA GCGTGCTGGG GCTGGCCGCC ATGTCGCAGG CCCAGCACCG CATCGTCGAG
GTCCGGGTCG GCCAGACCGA GATGCTGGCC GGCGACGCCT GGACCCTGAC CGCGATCCGC
GCGGCCCCCG GCCCGAACTA CACGTCCCTG ATCGCGACGA TCGAGGTCCG GCATGACGGC
AGGCTGGTCA CCGTGCTGCA TCCGTCCAAG CGCACCTTCC CCAGCCAGAA CCAGACGACG
ACCGAGGTCG CCATCCATAC CAACCTGATG TCCGACCTGT ACGGCGTGCT GGGCGACCGG
CACGGCACCG ACGCCGACCC GACCTACGTG CTGCGCCTGC ACTACAATCC GCTGGCGCCG
TGGATGTGGC TGGGCGGGCT GATCATGGCG CTGGGCGGGG CGCTGTCGCT GTCCGACCGG
CGGACGCGCG TCGGCGCGCC GCGCCGCGCC GCCGCCCCCG GCATGGTGGC CGCGCAATGA
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| Protein sequence | MTPELGNFAL ALACCLAGGQ AILPLVGARR RDPRLMALAP ALAVGQMLAL AFSFACLIDA
AVRDDFSVQN VAANSAAAKP LLYKITGVWG NHEGSVLLWA LILGICGGAV ALFGRNLPSA
LRARVIAVLG GVSAGFQLFC LTTSNPFDRV WPAPMDGQGM NPLLQDPGLA FHPPILYTGY
VGFAVPFAFA VAALIEGRVD AAWGRWVRPW AVAAWCFLTC GIALGSWWSY YVLGWGGYWF
WDPVENASLI PWLTGTALVH SAIVVEKREA LKIWTVLLAI GTFSFSLSGT FLVRSGILNS
VHAFANDPAR GIFILGLLAL VIGGSLLLFA IRAPALVAGG LFAPVSREGL LVVNNILLCS
ICAVVLTGTM YPPFMSLLFG KTISVGKPFF DATAAPLAIP LLAFMGFGPM MPWKRAQFWP
VLRRLWWAGI VTALAFCLMA WRIRDVLPLL AATGAVWVIA ASVADIAERV RLFRIPPGAS
LQRARMLPRA ALGAALAHAG VGISVLGLAA MSQAQHRIVE VRVGQTEMLA GDAWTLTAIR
AAPGPNYTSL IATIEVRHDG RLVTVLHPSK RTFPSQNQTT TEVAIHTNLM SDLYGVLGDR
HGTDADPTYV LRLHYNPLAP WMWLGGLIMA LGGALSLSDR RTRVGAPRRA AAPGMVAAQ
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