| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2827 |
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| Symbol | |
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| ID | 6976258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3090825 |
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| End bp | 3093263 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643392335 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_002277174 |
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| Protein GI | 209544945 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.595122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACC TTGCCGAATA TCGCCATCGC CCCTCCGGCC TCGCTGACTT CCTGCCCTGG
GCGGCGCTCG TTGGAGAGGG CGTGGTCATC AACAAGGACG GCTCGTTTCA GCGCACGGCG
CGGTTTCGCG GGCCGGACCT CGACAGCGCG ACACCGGCCG AGCTGGTCGG CGTCACCGCA
CGGCTGAACA ACGCGCTCCG CCGCCTTGGC TCCGGCTGGG CGATCTTCGT CGAGGCGCAG
CGGATCGCCG CCCAGACCTA TCCCCATTCG ATCTTTCCCG ATCCGGCCTC GGCCCTGGTC
GATCTCGAAC GGCAGGACGC TTTCGAGGAA GCGGGCGCGC ATTTCGAGAG CCGCTACTTC
CTCACCTTCG TGTGGTTGCC GCCGGCCGAG GACGCGTCCC GGATCGAAGG CTTCCTTTAC
GAGGGCCGCT CGCAGAGCGG CGTCGATCCA TGGGAGCTGC TGCGCGGCTT CGTCGATCGG
ACCAACCGCG TCCTGCAACT GGTCGAGGGC TTCATGCCCG AGGTCGCCTG GCTCGACGAC
GGCGACACGC TGACCTACCT GCACTCGACC ATCTCGACCC GCCAGCAGCG GGTGCGCGTC
CCCGAGACGC CGATGCACCT CGACGCGCTC CTGGCCGATG AGCCGCTCGC CGGCGGGCTC
GAGCCGCGGC TTGGGTCGCA CCACCTCCGC ACGCTGACCA TCGTCGGCTT CCCGACCGCG
ACCCACCCCG GAATCCTCGA CGAGCTGAAT CGCCTGGCCT TCCCCTATCG CTGGTCCACC
CGCGCGATCC TGCTCGACAA GACCGAAGCG GTGAAGCTGC TGACCAAGAT CCGGCGGCAG
TGGTTTGCCA AGCGCAAGTC GATCGCCGCC ATCGTCAAGG AAGTGATGAC GAACGAGGCG
TCGACACTGG TCGACTCCGA CGCGGCCAAC AAGGCGGCCG ACGCGGACCT GGCGCTGCAG
GAGCTCGGCA CCGACGATGT GGGGCAGGCC TACATCACCG CGACCGTCAC GGTCTGGGAC
GAAGAGCCCG GCCTCGCGGC CGAGAAGCTG CGCCTCATCG AGAAAGTCAT CCAGGGCCGC
GACTTCACCT GCATGCCGGA AGGGGTGAAC GCGCTGGAGG CGTGGCTCGG GTCCATCCCC
GGGCACGCCT ATGCCAACGT CCGACAGCCG CCGGTCTCGA CGCTGAACCT CGCCCATATG
ATTCCGCTGT CGGCTGTGTG GGCGGGGCCG GCAAGGGACG AGCATTTCCA GGCTCCGCCG
CTGCTGTTCG GCAAGACTGA GGGTTCGACG CCGTTTCGGT TGAGCCTGCA TGTCGGCGAT
GTCGGGCACA CCCTGATCGT CGGGCCGACC GGCGCCGGCA AATCGGTGCT GCTGTCGCTG
ATGGCGATGC AGTTCCGCCG CTATCGCAAC AACCAGATCT TCGCCTTCGA TTTCGGCGGC
TCAATCCGCA CCGCCGCGCT CGCCATGGGC GGCGACTGGC ACGATCTCGG TGGCAGCCTC
TCCGCGGGGT CGGAGCATTC CGTGTCGCTC CAACCGCTGG CGCGGATCGA CGCCCAGGCC
GAGCGCGCCT GGGCGGCGGA GTGGGTGGCG GCGATCCTCG CCAAGGAAGG CGTCACCATC
GATCCGACTG CAAAGGAGCA TGTCTGGTCG GCGTTGACGT CTCTGGCGTC CTCGCCCGTG
GGCGAGCGCA CCATCACAGG CCTCGCGGTG CTGCTGCAAT CGACGGCGCT GAAGCAGGCG
CTCCAGCCTT ATTGCGTCGG CGGTCCCTCC GGCCGGTTGC TCGATGCCGA GGTCGAACAG
CTCGGTTCCG CCTCGGTCCA GGCCTTCGAG ACCGAGGGGC TGATCGGCGC CGGCGCGGCG
CCCGCCGTGC TGACCTATCT GTTTCATCGC ATCGAGGGCC GTCTCGACGG TCGCCCGACG
CTGCTCATCA TCGACGAAGG CTGGCTGGTC CTCGATGACC CCGCATTCGC GCAGCAGCTC
CGCGAGTGGC TGAAGACCCT GCGCAAGAAG AACGCCTCCG TCGTCTTCGC CACGCAGTCG
CTCTCCGACA TCGACGGCAG CAACATCGCG CCCGCCATCG TCGAGAGCTG CCCGACCCGC
ATCTTCCTGC CGAACGAACG CGCGATCGAG CCGCAGATCA CGGCGATCTA TCGGCGCTTC
GGCCTCAACG ATCGCCAGAT CGAGATCCTC GCGCGGGCGA CGCCCAAGCG CGACTACTAC
TGCCAGTCGC GACGCGGCAA TCGCCTGTTC GAGCTGGGGC TCGGTCCCGT CGCGCTTGCC
TTCTGCGCGG CCTCGTCGAA CGCCGACCAC GCCGCGATCG AGCGCGTCAC CGCCGAGAAT
GGCCGCGAGG CCTTCACGCC CACCTGGCTC GCCGACCGCG AGCTTCTGTG GGCAGCCGAT
CTCATTCCCG ACCTGACCAA TCTGGAGACG TCATCATGA
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| Protein sequence | MLNLAEYRHR PSGLADFLPW AALVGEGVVI NKDGSFQRTA RFRGPDLDSA TPAELVGVTA
RLNNALRRLG SGWAIFVEAQ RIAAQTYPHS IFPDPASALV DLERQDAFEE AGAHFESRYF
LTFVWLPPAE DASRIEGFLY EGRSQSGVDP WELLRGFVDR TNRVLQLVEG FMPEVAWLDD
GDTLTYLHST ISTRQQRVRV PETPMHLDAL LADEPLAGGL EPRLGSHHLR TLTIVGFPTA
THPGILDELN RLAFPYRWST RAILLDKTEA VKLLTKIRRQ WFAKRKSIAA IVKEVMTNEA
STLVDSDAAN KAADADLALQ ELGTDDVGQA YITATVTVWD EEPGLAAEKL RLIEKVIQGR
DFTCMPEGVN ALEAWLGSIP GHAYANVRQP PVSTLNLAHM IPLSAVWAGP ARDEHFQAPP
LLFGKTEGST PFRLSLHVGD VGHTLIVGPT GAGKSVLLSL MAMQFRRYRN NQIFAFDFGG
SIRTAALAMG GDWHDLGGSL SAGSEHSVSL QPLARIDAQA ERAWAAEWVA AILAKEGVTI
DPTAKEHVWS ALTSLASSPV GERTITGLAV LLQSTALKQA LQPYCVGGPS GRLLDAEVEQ
LGSASVQAFE TEGLIGAGAA PAVLTYLFHR IEGRLDGRPT LLIIDEGWLV LDDPAFAQQL
REWLKTLRKK NASVVFATQS LSDIDGSNIA PAIVESCPTR IFLPNERAIE PQITAIYRRF
GLNDRQIEIL ARATPKRDYY CQSRRGNRLF ELGLGPVALA FCAASSNADH AAIERVTAEN
GREAFTPTWL ADRELLWAAD LIPDLTNLET SS
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