| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2683 |
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| Symbol | |
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| ID | 6976114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2950160 |
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| End bp | 2952793 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643392196 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002277036 |
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| Protein GI | 209544807 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.160264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACG GGCCGTCAAC TCTTCCGGTT GTCCTGGCAG GTGTTCTGGA TGCCATGCCC
GGCGGCGTGG TCGTGACCGA CGCGGACGGG CGCATCCTCT TCATCAATCG TGCGGCGGCG
CGCCTGTGCG GCGGACAGCC CGAGGAATGG GCCAGCCGTT CGCTGGCGGT CCTGCTGCCC
GACATGGACA TGACGCCGGA CGGCACCCCG CGCGAGGTGC GGCTGGCAGG CCGCGATGGC
GCCGCGTTGT GGCTGGAGGT GACCCTGAAC CGGGGGGGCG CCCTGCCGGG CGTGGGCCTG
GAGGTGCCGG AGGAGACGCC GCGAGAGATA CGGGTGGCGG CCCTGCGGGA CGTGACGGAC
GAGGTCGCGC GGCGCACGGC GGCGCATCTG TTTTCCACGA TCGTCAACCA CGCCGGCCGC
GGCGTGATGG TCCTGGATGA CCGGGACCGG ATCGTCTACG TCAATCCGGC CTTCACGCGG
CTGCTGGACT ACCGGCCGGA GGATGTCGTG GGGCGCGACG TGTCCGTCAT CCTCTCGCCG
GATGTGGACG ACCGGGCGGC GCTGGGCGAA TTCCGCCGCG ACCTGCATGG GCGCCGGACC
TTCGGCCGCG ACCTGCACGC GCGGTCGCGG TCGGGGCAGG ATATCTGGAT GTCCACCGCG
ACCAGTCCGG TGCGCGACGG CGGCGTGCTG GACGGCGGCG CGATCGTCAT CCTGTCCGAC
GAGACCCCGG CGACGGAACT GCAGCACCTG CGGCTGGACG TGACCTCGGC GCTGGCGGGG
GTCACCGGGT CCCGCGCCAT GGATTTCGAC GACGTCATGA CGCTGATCTG CGCGCGGATC
GAGGCGATCG CGCCGGGCGT CATGGCGTCG ATCATCCTGC TGAGCGGGGA CGGCACCGCC
TGGATGGCCG GTCGTGCGGC GATGCCCGAC GCCATTGCGG CGGCATGCGA CGGGTTTCCG
GTCGGCCCCA TGGCGGGCAC ATGCGGGGCC GCGATCTCTT CGGGGCAGGA GGTCCTGACC
TCCGATATCG AAACCGACCC GAACTGGACG CCGGCGATGC GCGACCTGAT GCGGCCCCTG
GGGGTGGTGG CATGCTGGTC GGTGCCGATA CGCCTGCGCG GCGGCACGGT CGCGGGCAGC
CTGGCGCTGT ATTTCCAGAC TCTGCGCGAG CCGTCGCCGT GGCATCGGCG GGTGGTCGAT
GCCTGCATCC AGCTCTGCAC CCTGGCGGTG GAGCAGGAGC GTGCCCGGGC GCAGATCGCG
CATCTGGCGC ATTACGACGC GGTGACCGGC CTGCCCAACC GCACGTGGCT GCGCGAGCAT
CTGGCGGCCC GCCAGGGGGC GGCGAACTGG TGCGGCCTGA CGCTGATGTC GGTCGACGTC
AACCGCTATC GCGAAATCCG CGACGCGCTG GGGGGCGCCG CGGCGGACGA GGTGCTGGGC
GGCATCGCGA AACGGCTGCG GGCCGTGGTG GGGCAGGACG ACATCCTGGT CCGTACCGGC
GAGGACGAGT TTTCCATCCT GACGGATTGC GGCCATGACG GGACGGAGCC GGAGTGCCGC
GATCGCAGCG GGATGATGGC GGTCGATCGG GCTTCGACCC TGGCAGGGGC GATCCTGCGC
GCGCTGGCCA GCCCGGTCGT CGTCAACGGC ATGCCGATCG GTTCGCCCAT CAGCATCGGA
ATCTGCGCCG GCCGCGACAA GGGGCGCACG GTCGAGACGC TGCTGCGCCA TACCCAGATC
GCGGTGTCGC GGGCGCGTGA AGCCGGGGGC AGCCTCTATC GCTTCTTCAG CCCGGAAATG
AACCGCTGGG CGCAGGACCG GGTGATGCTG GCCTCGGCGC TGGGCGACGC GCTGGCCGAT
GGCCGGCTGC GGCTGGTCTA TCAGCCGCAG GTGCGCTCGC GCAGCGGGGC GCTGTATGGG
GTCGAGGCCC TGGCGCGCTG GCATGATCCG GAATGGGGCG ACATCCCGCC CACGCGCTTC
ATCCCGATGG CCGAGGAAGC CGGGCTGATC GAGGCGCTGG GGGAATGGGC GCTGCGCCAG
GCCTGCCGCC AGATGGCGAT CTGGATGGCC CACGGGGTGG GGATTCCGGT CGTGTCGGTC
AATCTGTCGG CCCGGCATTT CAGCGATCCG GGCCTGCCGG GCCTGATCGG GTCCATCCTG
GAGGAATCCG GCATTCCACC CGGGCGCCTG ATGGTGGAAA TCACCGAAAG CACGATGATC
ACCGATTCCG AAACGACCAT CGCCGCGGCG CGCGCGATCC GCGCTCTGGG CGTGGGCCTG
TCCATGGACG ATTTCGGGAC CGGATTTTCC AGCCTGGCGA ACCTGGTCAG CCTGCCGCTG
AGCGAGGTGA AGATCGACCG GGCCTTCGTC GTCGGGCTGG AGCGGGCGGG GGATACCTAT
TCCATCGTGA ACGCGGTGCT GCGTATCGGG CAGAGCCTGG GGGTCACGGT GGTGGCCGAG
GGCGTCGAGA CCCAGCGGCA GCTCGACCTG CTGGACGGCC TGGACTGCCC GGTGGTGCAG
GGCTTCCTGA TGTCGCGTCC CCTCGATGCC GGAAAGGTGC CGTCCTGGCT GGAGGAATGG
CACCGGTCCC GCCCCGTGCC GGAGGCGCTG CCGCGTCGGG TCGTGGGCGC ATAG
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| Protein sequence | MFDGPSTLPV VLAGVLDAMP GGVVVTDADG RILFINRAAA RLCGGQPEEW ASRSLAVLLP
DMDMTPDGTP REVRLAGRDG AALWLEVTLN RGGALPGVGL EVPEETPREI RVAALRDVTD
EVARRTAAHL FSTIVNHAGR GVMVLDDRDR IVYVNPAFTR LLDYRPEDVV GRDVSVILSP
DVDDRAALGE FRRDLHGRRT FGRDLHARSR SGQDIWMSTA TSPVRDGGVL DGGAIVILSD
ETPATELQHL RLDVTSALAG VTGSRAMDFD DVMTLICARI EAIAPGVMAS IILLSGDGTA
WMAGRAAMPD AIAAACDGFP VGPMAGTCGA AISSGQEVLT SDIETDPNWT PAMRDLMRPL
GVVACWSVPI RLRGGTVAGS LALYFQTLRE PSPWHRRVVD ACIQLCTLAV EQERARAQIA
HLAHYDAVTG LPNRTWLREH LAARQGAANW CGLTLMSVDV NRYREIRDAL GGAAADEVLG
GIAKRLRAVV GQDDILVRTG EDEFSILTDC GHDGTEPECR DRSGMMAVDR ASTLAGAILR
ALASPVVVNG MPIGSPISIG ICAGRDKGRT VETLLRHTQI AVSRAREAGG SLYRFFSPEM
NRWAQDRVML ASALGDALAD GRLRLVYQPQ VRSRSGALYG VEALARWHDP EWGDIPPTRF
IPMAEEAGLI EALGEWALRQ ACRQMAIWMA HGVGIPVVSV NLSARHFSDP GLPGLIGSIL
EESGIPPGRL MVEITESTMI TDSETTIAAA RAIRALGVGL SMDDFGTGFS SLANLVSLPL
SEVKIDRAFV VGLERAGDTY SIVNAVLRIG QSLGVTVVAE GVETQRQLDL LDGLDCPVVQ
GFLMSRPLDA GKVPSWLEEW HRSRPVPEAL PRRVVGA
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