| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2547 |
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| Symbol | |
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| ID | 6975977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2799644 |
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| End bp | 2802568 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643392064 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002276905 |
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| Protein GI | 209544676 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.366093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.924823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGGA TCCTGGCCTG GGTCATTCTG AAGCATGGTG TGATCGGTGT CGCCGCGGCG
GTGATGCTGT GTGTATCGAG CAGCTATGTG GCGATGATGC TGCTGCGCCG GCTGCGGCGC
ACGGCGGGAC GTGGCCGGGT GATCTGGGCG GCGGCGGCGG GCGTTGCCGG GGGATTTGGC
GTCTGGGCGA CGCATTTCCT CGGCATGCTG GCGTTTGGGT CCGACGTGGT GGCGGCCTAT
CGGCTGCGCC CCGTGGTGCT GTCGCTGGGC GTGTCCATGC TGGCGAGCGG CGCCGCCGTT
CTGCTGGCCG GCTGCGTGGC GCCCGTCGCC GCCGGGGCGT TGGCCGGCGG GGACGCGGAT
GGCGATGCGG ATGCCGGGGC GGATCGGGCG GCCCGGACGC GGCGGACTCG CATGCGGGAA
ATCCTGGTGG GCGTCGGCGC GGGTATCCTG TTCATCCTGG GCGTGGCGGC CATGCATGTG
ATGGGCCTGC AGGCGGCGCG CATGCACGGG CTGACATGGA ACGAGCCGAT GTCCGCCCTG
GCGCTGCTGG TCGGCGGTGG ATTTTCCATC GCGGCGTTCC TGACCGCCCG GTGGGGCAGC
AGCGCGCCGT TCCGCTGCCT GGTGCCCGCG TGGCTGATGA CGCTGGCGAT CATGAGCCTG
CATTTCATCG CCATGGCCGA TACGGACGTG GTGGCGGCGT CGAGCCCGCC GGACCTGGCG
CGTCACCTGC TGTCCCCGAT GCTGATGGTC GTGATTATCG GCGTGATGGC GTGCGCGCTG
CTGCCGATCG GGCTGGCGGC CTCGATCATT ACCTATCGCG CCGAACTGGC GGCCTGGCGG
AACGAGCTGG GCTTTCGCCT GCTGGTGGAC GAGGCGCGGG ATTATGCGGT GTACATGCTG
GACGACGCGG GGCGGGTCAC CACCTGGAAC GTCGGCGCGC AGCGGCTGAC GGGATATTCC
GCGCGCGAGG TGCTGGGGCG GGTGGGCGGC CGCCTGTATT CCGAGGCCGA GCGGCGCGAC
GGCGTGCCGC AGCGGCTGCT GGCCGAGGCG CGCGAGGGCA CGGTGGCGCG CGAGGGATGG
CGCTATCGCA AGGACGGAAG CCCGTTCTGG GCGTCGGTCA CGATCAACCC GGTCCGGGAC
GAGGCCGGGG CCCAGGTCGG CTTTGCCGTG AGCGTGCGCG ACGACACCAA GCGCAAGACC
GATGCCGACC GGATCGCGCA GATGACGCGC AATCTGGACA TCGCGCTGCA GAACATGTCG
CACGGGCTGT GCCTGTTCGG TGCCGATGCG CGGCTGATCC TGGCCAACGG GCGCTATGCC
GAGATCTTCG GCCTGCCCGA GGGCGCGGCG AAGCCGGGCA TGACCTACCG GGCGCTGCTG
ACGCTGGTCT ATACCCGCCG GGGCCTGTCG GCCGAGGCCG TGCGGCGGCG GGTCGACGGC
ACGTTCGAGC GCCAGATGGC CCTGGTCCGC AGGCGGCGGG GCGGGACCTC GGTCCTGCAT
CCCCGGCCCG ACATGGCGGT GCAGGTGCAG TACAGAATCA TGGCCGACGG CGGATGGGTG
GCGACCTACG AGGACATTAC CGAACGGCTG AGGGCGGAAG CGCGCATCAC CTATCTGGCG
CATCATGATT CGCTGACCGG GCTGGCCAAC CGCGCCTGGT TCACCGAGGC GCTGGACCGC
GCCCTGACGC TGGCGGCCAG CGGCACGCAG CGGGTGGCGG TGATCGGCAT CGACCTGGAC
AAGTTCAAGG AGATCAACGA CCAGCACGGC CATGCGGTGG GCGACCAGGT GCTGGTGACC
CTGGCCGCGC GCATCCGTGA CGTCCTGGAG GACGACGAAC TGGTCGCCCG GCTGGGCGGC
GACGAATTCG CCGCGGCCAA GCGGTTCGAC GACATGGCCG AACTGAACGC CTTCATCGGC
CGGCTGGAGG AGTGCCTGTC GCAGCCCATC GGGGTGGACG GGTTCGAACT GCGGCCCAAT
GCCAGCATCG GCGTATCGCT GTACCCCCGC GACGCGGAAA CGGTCGAGGC GCTGATGGGC
GACGCGGACC TGGCGATGTA TCGCGCCAAG GGGGCGTTGC GCGAGCATGT GTGCTTCTAC
GAGGCGGAGA TGGACGAGGC GGCGCGCGAC CGCCGCAGCC TGGTCGCGGC GTTGTGGGAG
GCGGTGGACC ACCATCAGTT CCATCTGCAT TTCCAGGTGC AGAAACGCGT GGCCACCGGC
GAGATCACCG GCTTCGAGGT GCTGCTGCGC TGGCACCACC CGGAACGCGG CTGGGTGGCG
CCGATGGATT TCATTCCCCT GGCCGAGGAA TGCGGCGCCA TCCTGCCGAT CGGCGAGTGG
GTGCTGCGCC AGGCCTGCCG CGAGGCCGCC CGCTGGTCCC GCCCCTACCG GATCGCGGTC
AACCTGTCGG CCGTGCAGCT GGGCGAGGAC GGGCTGGCCG ACATGGTGCG CGCGATCCTG
GAGGAAACCG GCCTGGCCCC GTCGCGGCTG GAACTGGAGA TTACCGAGAC CGCGATCATC
GTGGACAAGC AGCAGTCGCT GCGCACGCTG CAGCGGATCA AGGCGCTGGG GGTGTCGATT
TCGATCGACG ATTTCGGCGT GGGCTATTCG TCGCTGGAAA CGCTGCGGAC CTTCCCCTTC
GACAAGATCA AGATGGACCG CAGCTTCATG ACCGAGATCG AGCGGTCGCC GGAATCGAAG
GCGATCCTGC GCGCGATCCT GGCGCTGGGC CGCAGCCTGA CCATTCCGGT CCTGGCCGAG
GGCGTGGAGA CGCAGGTCCA GCTCGACATC CTGCATGCCG AGGGCTGCAT CGAGGCCCAG
GGATATCTGC TGGGCCGGCC GAAGCCGATG GAAATCGACG CCGAGCCGTA CCGGCCGCTG
GACGAGGACG GCTGGAGCGA TTTGTCATTT GAGAAAATCA CATGA
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| Protein sequence | MSRILAWVIL KHGVIGVAAA VMLCVSSSYV AMMLLRRLRR TAGRGRVIWA AAAGVAGGFG
VWATHFLGML AFGSDVVAAY RLRPVVLSLG VSMLASGAAV LLAGCVAPVA AGALAGGDAD
GDADAGADRA ARTRRTRMRE ILVGVGAGIL FILGVAAMHV MGLQAARMHG LTWNEPMSAL
ALLVGGGFSI AAFLTARWGS SAPFRCLVPA WLMTLAIMSL HFIAMADTDV VAASSPPDLA
RHLLSPMLMV VIIGVMACAL LPIGLAASII TYRAELAAWR NELGFRLLVD EARDYAVYML
DDAGRVTTWN VGAQRLTGYS AREVLGRVGG RLYSEAERRD GVPQRLLAEA REGTVAREGW
RYRKDGSPFW ASVTINPVRD EAGAQVGFAV SVRDDTKRKT DADRIAQMTR NLDIALQNMS
HGLCLFGADA RLILANGRYA EIFGLPEGAA KPGMTYRALL TLVYTRRGLS AEAVRRRVDG
TFERQMALVR RRRGGTSVLH PRPDMAVQVQ YRIMADGGWV ATYEDITERL RAEARITYLA
HHDSLTGLAN RAWFTEALDR ALTLAASGTQ RVAVIGIDLD KFKEINDQHG HAVGDQVLVT
LAARIRDVLE DDELVARLGG DEFAAAKRFD DMAELNAFIG RLEECLSQPI GVDGFELRPN
ASIGVSLYPR DAETVEALMG DADLAMYRAK GALREHVCFY EAEMDEAARD RRSLVAALWE
AVDHHQFHLH FQVQKRVATG EITGFEVLLR WHHPERGWVA PMDFIPLAEE CGAILPIGEW
VLRQACREAA RWSRPYRIAV NLSAVQLGED GLADMVRAIL EETGLAPSRL ELEITETAII
VDKQQSLRTL QRIKALGVSI SIDDFGVGYS SLETLRTFPF DKIKMDRSFM TEIERSPESK
AILRAILALG RSLTIPVLAE GVETQVQLDI LHAEGCIEAQ GYLLGRPKPM EIDAEPYRPL
DEDGWSDLSF EKIT
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