| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2303 |
|---|
| Symbol | |
|---|
| ID | 6975733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2551847 |
|---|
| End bp | 2553484 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643391831 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002276673 |
|---|
| Protein GI | 209544444 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.292812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0663224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACG TCGTTCCTGT GCCATCGGCT GGCGAGCCGG TCATCCACGC CTCGCCCCCC
CGGCCGTCCT ATATCCCACC CTTCGGGGTG CGCACGGTGA TCGGCTGCCT GGGCATGCTG
CTGGCCGTGC ATGTGGCGGG CTTCAACGAA CACGTGACCG AGATCGGCCT GACCGATATC
CGCGGCGCCA TGCACATCGG CTACGATGAG GGAACGTGGC TGATCGCCAT CTACGAATCC
TTCAACATCG CGGCCATGGC CTTCACGCCG TGGTTCTACA TGACGTTTTC CATCTACCGC
TTCTCGATCT TCGTGACGGC CGTCATGGCG CTGCTGGCGA TCCCGGCGCC GTTCATGCCC
GATGTCACGT CGCTGTGCAT CCTGCGGGCC TTCCAGGGGC TGATGGCCGG GTGCCTGCCG
CCGGTGCTGA TGACGGTGAT GCTGAAATAC CTGCCGCCGG AAATCCGCGT GTTCGGCATC
GGCGGCTACG CGATGAGCGC GACCTTCGGC CCCAACCTGG GCCTGCCGCT GGAGGCCTTC
TGGTTCGAAC GTGTCGGCTG GCACTGGCTC TATTGGGAAA TCATCCCGCT TGCCGCGCTG
TCGATCGCCA TGATCGCGTA CGGGCTGCCG CGCGATCCCA TGCATTTCGA ACGGTTCCAG
AAGTTCAACT GGCTCGGCCT GCTGGTCGGC CTGCCCGCCA TCTGCGCGCT GGTCATCGTG
CTCTACCAGG GGGACCGGCT GGACTGGTTC CGCTCGCCCG TCATCACCAA CCTGTCCTTC
TGGGGCGGGG CGGCGTTCAT CGTCTTCGTC ATCAACGAGG CGTACCATCC CAGCCCGTAT
TTCCGCGTGC AGTACTGGCG GTCGCGCAAC ATCCAGGCCT CGCTGCTGTC GCTGGTCGGC
ATCCTGGCCA TCTGCGCCAT GATGGGCGAA ATCCCCGGCA TCTACCTGGA GGCCGTGCGC
GGCTATCGCC CGATCCAGGC GGCCCCCGTC TCACTGGTCG TGGCGCTGCC GCAGCTCCTG
ATGCTTCCGC TGATCGCGGC CATCTGCAAC AGCCGCAGGG TGGATTGCCG CTACGTGCTC
TCGGGCGGAA TGCTCTGCCT GGCCGGCGCG GCCTGGCTGG GCACGTGGCT GACCGTGGAC
TGGGTGCGGG ACAATTTCTA CGCGCTGCAG GTCCTGCAGA TCTTCGGCCA GCCCATGACC
GTCATTCCCA CGCTGATGCT CGCCACCCTC GCGATGGGGC CCGCCGACGG TCCGTTCATC
TCGGGCATGG TGAACATGCT CAAGGGCCTG GCCAACGCGG TGGCATACGC CGTGTTCGCG
GCCCTGACCC GGCGGCGGGA GCAATATCAT TCCACCATGC TGCTGGACCA TCACGGCACG
CACGGCCTGG CGCTGCAGGG GATGGGCGAT CCGGTCAACC GGCAGCTTGC CGCCACGTCG
CCCGACAGCG CGCATGTCGC GCGCAACACG CTCCAGGTCT TTCATACCTT CGTGCACGAG
CAGTCGCTCG TCCTCGCGCT GGCCGACATC TACTTCGTGC TGATCTGGGT CTGCCTCGGC
TACGCGGTCA TGAACCTCAT CCTGCCGCGC CGGGTCTATC CGCCGCGCGC GCCGTCGCCG
AACACTCCCG CCCGCTAA
|
|---|
| Protein sequence | MNNVVPVPSA GEPVIHASPP RPSYIPPFGV RTVIGCLGML LAVHVAGFNE HVTEIGLTDI
RGAMHIGYDE GTWLIAIYES FNIAAMAFTP WFYMTFSIYR FSIFVTAVMA LLAIPAPFMP
DVTSLCILRA FQGLMAGCLP PVLMTVMLKY LPPEIRVFGI GGYAMSATFG PNLGLPLEAF
WFERVGWHWL YWEIIPLAAL SIAMIAYGLP RDPMHFERFQ KFNWLGLLVG LPAICALVIV
LYQGDRLDWF RSPVITNLSF WGGAAFIVFV INEAYHPSPY FRVQYWRSRN IQASLLSLVG
ILAICAMMGE IPGIYLEAVR GYRPIQAAPV SLVVALPQLL MLPLIAAICN SRRVDCRYVL
SGGMLCLAGA AWLGTWLTVD WVRDNFYALQ VLQIFGQPMT VIPTLMLATL AMGPADGPFI
SGMVNMLKGL ANAVAYAVFA ALTRRREQYH STMLLDHHGT HGLALQGMGD PVNRQLAATS
PDSAHVARNT LQVFHTFVHE QSLVLALADI YFVLIWVCLG YAVMNLILPR RVYPPRAPSP
NTPAR
|
|---|
| |