| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2257 |
|---|
| Symbol | |
|---|
| ID | 6975687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2505632 |
|---|
| End bp | 2506522 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643391785 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002276627 |
|---|
| Protein GI | 209544398 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.304398 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTGA AGAGTCTGGA GGCCGTGCTG TGGATCGACA GGCTGGGCGG CTTCAAGGCG
GCGGCCGAGG CGCTGCGCAT GACGCAGCCC GCGATCTCGA TCCGGGTGTC GCAGCTGGAG
GCCATGCTGG AGACGCGGAT CTTCCATCGC TCCGGCAAGC GTGTCGTGCC CACGCCCGTC
GGCGTGACGC TGATCCACTA CGCCGAGCGC ATCCTGCAGC TGCGGGACGA GGCACTTCTG
ACCATCAAGG GCCATAACGA GGAAAACGGT ATCCTGCGCC TCGGGACCGT GGAAACGACC
GCGCATACCT GGCTGGCGCA ACTGCTCTGC CGCATCGACG AGAAATACCC CAATATCACG
GTCGATCTCG ATATCGGCAT TTCCGACGAT ATCCAGCGCA AGGTCGCGAA GGGCATGCTG
GATGTCGGCC TGTTCATGGG GCCGGTCAAT TCTCCGATGA TGATCGAGAC GCCGGTCTGC
AGCTTCGAGG TCGCGCTGCT GGCGCATCGC ACGGTCGTGG GCCAGCGCGG TGGGCGCACG
GATCTGGGCA GCCTGCCCGC GCTTCCGATC ATGACCTTCT CACGCAATAC CGTTCCGCAT
TCGATGCTGC ACCGCCTGCT GGGCAGGGAA GGGGGCAGCC ACCATCGCGT TCATGCCATG
AGTTCGGTAC CGACGATCGT CAGCATGCTC CTCAGCGGCG CGGGACTGGC CCTGTTGCCG
CCGGATGTCG TGCGCGAACA TCTGGATTCG GGTGCATTGT GCAGACTCGA TGTCGGGCAG
GCGCTGCCGC CTCTCAATTG CGTCGCCGGC CGGCTGATGA AGTACAGCTC GGGCCTGGTG
GAGGATGTCG TCGCCATGGC GCGGAACGTG GCGCAAAGCG CAGGGGCCTG A
|
|---|
| Protein sequence | MDLKSLEAVL WIDRLGGFKA AAEALRMTQP AISIRVSQLE AMLETRIFHR SGKRVVPTPV
GVTLIHYAER ILQLRDEALL TIKGHNEENG ILRLGTVETT AHTWLAQLLC RIDEKYPNIT
VDLDIGISDD IQRKVAKGML DVGLFMGPVN SPMMIETPVC SFEVALLAHR TVVGQRGGRT
DLGSLPALPI MTFSRNTVPH SMLHRLLGRE GGSHHRVHAM SSVPTIVSML LSGAGLALLP
PDVVREHLDS GALCRLDVGQ ALPPLNCVAG RLMKYSSGLV EDVVAMARNV AQSAGA
|
|---|
| |