Gene Gdia_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2218 
Symbol 
ID6975647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2460659 
End bp2461219 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID643391747 
Productintracellular protease, PfpI family 
Protein accessionYP_002276590 
Protein GI209544361 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.554266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.164233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATGT TGGATGGCAG AACGATTGCC GTACTGGCCA CGGACGGCGT CGAAGAAGTC 
GAACTGACGC AACCGGTCGA GGCGCTGCGC GATGCGGGGG CGCGTACCGT CCTGGTGTCG
CCGAAGACCG GACGGATCCA GGCCATGAAG GAGGATGTCA ATCCGGCTGG CCACTATGAC
GTCGATCGCC CGGTCGCCCA GGCGGCGGCG TCGGAATTCG ACGGGCTGGT CCTGCCGGGG
GGCACCACGA ATCCGGATCA TCTGCGCATC GATGCGGAAT CCGTGCGCTT CGTGCGGGAA
TTCGTGGAGT CCGGCAAGCC CATGGCCGCC ATATGCCACG GACCATGGAC GCTGATCGAC
GCAGGCGGCG TGGCGGGCCA CCGCATGACG TCATGGCCGT CCCTGCGGAC CGACCTGACC
AATGCGGGCG CCCAATGGGT GAACGAGACG GTCGTCACGG ACGGAACGCT GGTCACGTCA
CGCAATCCCG GTGACCTGAA GGCGTTCTGT TCGGCCATGA TCACGCTGTT CGCGGACACG
CCGGCGGCGC ACGCGCTGTA A
 
Protein sequence
MGMLDGRTIA VLATDGVEEV ELTQPVEALR DAGARTVLVS PKTGRIQAMK EDVNPAGHYD 
VDRPVAQAAA SEFDGLVLPG GTTNPDHLRI DAESVRFVRE FVESGKPMAA ICHGPWTLID
AGGVAGHRMT SWPSLRTDLT NAGAQWVNET VVTDGTLVTS RNPGDLKAFC SAMITLFADT
PAAHAL