| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2107 |
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| Symbol | sdhA |
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| ID | 6975534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2333985 |
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| End bp | 2335796 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643391636 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002276481 |
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| Protein GI | 209544252 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA TCACTCTCCC TTCATCAAAT GCCTATCGGA TCGTCGATCA CGCCTATGAC
GTGGTCGTCG TCGGCGCCGG CGGATCGGGT CTGCGCGCCA CGCTGGGCAT GGGCGCCGCC
GGCCTGAAGA CCGCCTGCGT CACCAAGGTC TTCCCCACCC GCAGCCATAC CGTCGCCGCC
CAGGGCGGCA TCGGCGCGTC CCTGGGCAAC ATGGCCGAGG ACAACTGGCG CTGGCACATG
TACGACACCG TCAAGGGGTC GGACTGGCTG GGCGACCAGG ACGCCATCGA ATACATGTGC
CGCGAGGCGG TTCCCGCCGT GCAGGAACTG GAACATCTGG GTGTTCCGTT CTCGCGCACC
GAGGAAGGCA AGATCTACCA GCGCCCCTTC GGCGGCCACA TGCGCAATTA CGGCGAGGCC
CCGGTGCCCC GCGCCTGCGC CGCCGCCGAC CGCACCGGCC ATGCCATCCT GCACACGCTG
TACCAGCAGT GCCTGAAGCA TAACGTCGAA TTCTTCGTCG AATATTTTGC CCTGGACCTG
ATCATGGACG ACCAGGGCGC CTGCCGCGGC GTGATCGCGT GGTGCCTGGA AGACGGTTCG
ATCCACCGCT TCCGCGCCCA GACGGTGGTG CTGGCGACCG GCGGCTACGG CCGTGCCTAC
CAGTCCTGCA CGTCGGCCCA CACCTGCACG GGTGACGGCG GCGGCATGGC GATGCGCGCG
GGCGTGCCGA CCCAGGACAT GGAATTCGTC CAGTTCCACC CGACCGGCAT CTATCCGGCC
GGCTGCCTGC TGACCGAAGG CTGCCGTGGC GAGGGCGGAT ACCTGACCAA TTCCGAGGGC
GAGCGCTTCA TGGAGCGCTA CGCGCCGACC GCCAAGGACC TGGCGTCGCG CGACGTGGTG
TCGCGCTCGA TGACCATCGA GATCAACGAG GGTCGCGGCT GCGGCCCGAA AAAGGACTAC
ATGCTGCTGC ACCTGGAGCA TCTGGGTGCG GACCTGCTGC ATGAGCGCCT GCCGGGCATT
TCCGAGACCG CGCGCATCTT CGCCGGCATC GACGTGACCA AGGAGCCGGT GCCCGTCCTG
CCGACCGTGC ATTACAACAT GGGCGGCATT CCCACGAACT ATCATGGCGA GGTCATCCGC
CCGACGGCCG ACAATGTGGA CGCTGTCGTG CCCGGCCTGA TGGCGGTGGG CGAGGCCGCG
TGCGTGTCGG TGCATGGCGC CAACCGCCTG GGCACCAATT CGCTGCTGGA CCTGGTGGTG
TTCGGCCGCG CGGCCGCCAA GCGCGCCGCC GAGCTGATCA AGCCCATGGA GACCATCGCC
CCGCTGCCCC CCAAGGCGGG CGAGGCCGCG CTGGACCGCC TGGACCGTCT GCGTTCGGCC
AAGGGCGGCA CCCACGTGTC GGTCATGCGC GACACGCTGC AGCGCACGAT GCAGAAGCAT
GCCGCCGTCT TCCGCAACAC CAAGAGCCTG GCGGAAGGCG TCGAGAAGAT AAAGGACATA
TGGACGGGCG TGCCCGACCT GTCGATTTCC GATCGCTCGC TGATCTGGAA CACCGACCTG
ATGGAAGCGC TGGAATTCGA GAACCTGCTG GCCAACGCCA CCGTTACCAT GGCGGGCGCC
GAGGCCCGGC ACGAAAGCCG CGGCGCGCAG GCGCACGACG ACTACCCCGA GCGTGACGAC
AAGAACTGGA TGAAGCACAC CGTCGCCCAT CTGGACGACA AGGGTGGCGT GGAACTGTCC
TACCGCCCGG TGCACATGAA GACGCTGACC GACGAGGTCC AGGTCTTCCC CCCCAAAAAG
CGCGTCTACT AA
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| Protein sequence | MNAITLPSSN AYRIVDHAYD VVVVGAGGSG LRATLGMGAA GLKTACVTKV FPTRSHTVAA
QGGIGASLGN MAEDNWRWHM YDTVKGSDWL GDQDAIEYMC REAVPAVQEL EHLGVPFSRT
EEGKIYQRPF GGHMRNYGEA PVPRACAAAD RTGHAILHTL YQQCLKHNVE FFVEYFALDL
IMDDQGACRG VIAWCLEDGS IHRFRAQTVV LATGGYGRAY QSCTSAHTCT GDGGGMAMRA
GVPTQDMEFV QFHPTGIYPA GCLLTEGCRG EGGYLTNSEG ERFMERYAPT AKDLASRDVV
SRSMTIEINE GRGCGPKKDY MLLHLEHLGA DLLHERLPGI SETARIFAGI DVTKEPVPVL
PTVHYNMGGI PTNYHGEVIR PTADNVDAVV PGLMAVGEAA CVSVHGANRL GTNSLLDLVV
FGRAAAKRAA ELIKPMETIA PLPPKAGEAA LDRLDRLRSA KGGTHVSVMR DTLQRTMQKH
AAVFRNTKSL AEGVEKIKDI WTGVPDLSIS DRSLIWNTDL MEALEFENLL ANATVTMAGA
EARHESRGAQ AHDDYPERDD KNWMKHTVAH LDDKGGVELS YRPVHMKTLT DEVQVFPPKK
RVY
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