| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1996 |
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| Symbol | |
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| ID | 6975422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2216731 |
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| End bp | 2218233 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643391525 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002276371 |
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| Protein GI | 209544142 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGGT TTTCTCTTCC GCGCCGCGCC GGGCTGCTGG TCCTGGCGGC GCTGTCGGGC
TGCACGCTGA TCCCCGACTA CAAGCGGCCG GCGCTGCCGG TCGCGGCAAG CTGGCCGAAA
GGCGAGGCCT ATCATGCCGG CAGCACCGGG CAGATCGGGA CGGCGGCGTC CGACCTGGGC
TGGCGCGACT TCTTCGTCGA TCCGCGCCTG CAGGCGCTGA TCGCGCTGGC GGTGCGCGAC
AATCGCGACC TGCGTTCGGT GGCTTCGGCG GTCATCGAGG CCCAGGGCCA GTACCGGGTG
CAGCATGCCT CGCTGTTCCC GCAGATCGGC GGGACCGGGA TGGCGCTCTA CCAGGCGCCG
TCGGGGAATG GGGGCCTGAG CTTCGCGCCG GGCCTGGATG CGGGCAAACA CGGCGAGTAC
TACAGCAACG GCCACGTCTT TAAATATTAC TCGGGCGGCA TCGGCTTCTC GTCCTACGAG
ATCGATCTGT TCGGCCGCAT CCGCAGCCTG TCGCGCGAGG CATCGGACCA AGTGCTCAGC
CAGGCCGCCA ACGCGCGCGG GCTGCTGATC AGCGTGATCT CGCAGGTTGC GACGACCTAT
GTCGCGTGGC TGGCGGACCG CGAGCAGTTG CAGGTGACCG AACGTACCCT GGCGTCCCAG
CAGGATACGC TGCGCCTGAC CCAGGCGCGG TTCGACCGGG GCGAGACCGA CCAGCTGACC
CTGCGCCAGG TGGAAACCCA GGTCGAGCAG GCAGCCGCCT ATCGTGCCCA GTACCTGCGC
CAGATCGCGC AGGATGAAAA CGAACTGGTT ATGCTGGTGG GCGCGCCGCT GCCGGCCAAC
CTGCCGGACC CGGCCCCCTT CGGCCGCCAG ACGGTGCTGG CCGACCTGCC GGCGGGGCTG
CCGTCCGACC TGCTGGACCG GCGGCCGGAT GTCGTGTCGG CGGAATTCGC GCTGCTGTCG
GCCAACGACG ATATCGGCGC CGCGCGCGCC GCCTTCTTCC CGCGCCTGAT CCTGACGGCG
TCGGACGGGG TGTCCAGCCT GCAGTTCCGC AACCTGTTCA CCTCCGGCGC CACGACGTGG
GGGGCCAACC CGCAATTGCA GATCCCGCTG CTGACCTGGG GCCAGAACGA GGGATCGCTG
CAGGTCTCCA AATCCCGGCG GGACCAGCGC CTGATGGCGT ACGAAAAGGC GATCCAGACC
GCGTTCCACG AGGTCTCGGA CGCCCTGGCG GCGCGGGCGA CTTACCTGGA CCAGTCGCGG
CAGCTCGACG CGCTGGTGGG GTCCTCGGCC GATGCGTACC GGCTGGCGCG GATGCGCTTC
GACGCGGGGG TGGATTCCTA CCTGAACACG CTCGAGGCGC AGCGCGCGCT CTATACCGCG
CAGCAGAACC TGATCGTAGT GCAGGAAGCG CGCTACCAGA ACCTGATCAC CGTCTATCGC
GCCCTGGGCG GCGGCTGGAC CGAACGCACC ATTCCGCCGG CGACGGCGGT CCGGTCGGGG
TAG
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| Protein sequence | MNGFSLPRRA GLLVLAALSG CTLIPDYKRP ALPVAASWPK GEAYHAGSTG QIGTAASDLG
WRDFFVDPRL QALIALAVRD NRDLRSVASA VIEAQGQYRV QHASLFPQIG GTGMALYQAP
SGNGGLSFAP GLDAGKHGEY YSNGHVFKYY SGGIGFSSYE IDLFGRIRSL SREASDQVLS
QAANARGLLI SVISQVATTY VAWLADREQL QVTERTLASQ QDTLRLTQAR FDRGETDQLT
LRQVETQVEQ AAAYRAQYLR QIAQDENELV MLVGAPLPAN LPDPAPFGRQ TVLADLPAGL
PSDLLDRRPD VVSAEFALLS ANDDIGAARA AFFPRLILTA SDGVSSLQFR NLFTSGATTW
GANPQLQIPL LTWGQNEGSL QVSKSRRDQR LMAYEKAIQT AFHEVSDALA ARATYLDQSR
QLDALVGSSA DAYRLARMRF DAGVDSYLNT LEAQRALYTA QQNLIVVQEA RYQNLITVYR
ALGGGWTERT IPPATAVRSG
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