Gene Gdia_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1976 
Symbol 
ID6975402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2192729 
End bp2194507 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content70% 
IMG OID643391505 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002276351 
Protein GI209544122 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.14941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCATCG GCAACAGGGT CCTGCCCCTG CCCGATCCTG TTGCCTGGGT TCGCGGACTG 
CTGGCGCCGG CTGCCGAAAT CCGCACCCAC GACGCGGCGT CGGCCTATCA CGAATACCGC
ACGCGCCTCG TCTCGCCGCT GATGCGGCGG ATTTTGCTGG TCAACGCCCT GCCGCTGATG
CTGCTGGCCC TGACGCTGCT GTATCTGAAC CAGTTCCAGA ACAGCCTGCT GGAGGCCGAG
GTCACCGCCC TGCGCGAACA GGCGCGCATC TATGCCGGCG CGCTGGGGCA GAGCGCCGTG
GTGTCCGGCC GGGGCAGCGA CCCGATCCTG GACGCCCCGC TGGCGCGGCC GCTGCTGCTG
CGCCTGACCG AGCCCAGCCC CGCCGCCCAT GCCCGCCTGT TCGCACCCGA CGGCCAGCTT
GTGGCCGACA GCCGGGTGGA ACAGGCCGCG GTCCTGCATC GCGGCACGCG CGGACAGATC
GAAAGCCAGC CCCTGCCCTC GCCCGTCGCG GCCGATGACG GCGACGACCG CGCCGCCGGG
GCCATGGCGA ATGCCGGCTT CGCCGAACGG TTCTATGACC GCCTGCTGTC GCTGCTGCCG
ACGCTGTCGG GTGCGCGGAT CGTGACGCTG GATACGCCGG ATACCGATCC CAGCGTCCAG
CCGGTCATGG GGGCCGACGG GCAGTCGACG CCGGAAATGC CCCCCTATAT CCGCCGGACC
GCCAACCGCC ACCTGATCGT CACGGTGGCC GAACCGGTGA TGCATGACGG GCAGACCATC
GGCATCATCC AGTTGACGCG CCAGGCCCGC GATGTCGATC GCTCGCTGTT CGCGGTGCGC
TCGTCGATCC TGTCGCTGGT GCTGATCGCG CTGGCCATCA CCGTGCTGCT GTCGTGGTAC
CTGTCGCTGA CCATCGCGCG GCCGCTGCTG CGGCTGGCGG CGTCGGCCCA CGTCATCCGC
GAATCCCACG GCCGGTCCGA CACGGTGCCG CCGCGCCTGC TGGCACGGCG CGACGAAATC
GGCGAGGTCG CGCGCGCCCT GCAGGACAGC GCCCGCGCCC TGTGGGCGCG CATGGATGCG
ATCGAGCGGT TCGCCGCCGA TGTCAGCCAC GAGATCAAGA ACCCGCTGTC GTCCATCCGC
TCGGCGATCG AAACCCTGGT GCGGATCGAG GATTTGAACC GCCAGCGGCG GCTGCTGTCC
ATCATCAATG ACGACGTGCG CCGGCTGGAC CGGCTGATCA CCGACATTTC GGACGCCAGC
CGTGTCGATG CCGAACTGTC GCGGACGCGC ACCGAACCGG TGGGGGTGGT GCCGATCCTG
TCGGTGCTGG CGGAAATCCA TCAGGCCACG CGCGCACCCG GCCAGCCGAT CCTGGCGATC
AGCGTCACGG CCGCCGACCG GTCGCTGACG GTGCAGGCGG TCGAGGACCG TCTGGTCCAG
GTGCTGCGCA ACCTGATCGG CAACGCGATC TCGTTCTCGC CGCCCGACGG GCGCATCACG
CTCAGCGCCG TGCCCGCCGC CGGGGGCATG GTGGACATCG CGGTGGCGGA CGAGGGCCCG
GGCATTCCCG CCGCCAAGCT GAACAGCATC TTCGACCGTT TCTATTCCGA ACGGCCGACC
ACCGAGAATT TCGGCCAGCA TTCCGGGCTG GGCCTGTCCA TCAGCCGCCA GATCGTCGAG
GCCCTGAAGG GTACCATCCG CGCCGAAAAC AGGGTGGGAA CGGACGGCCG CGTGGTGGGT
GCGCGCTTTG TGGTGACGCT GCCGCGCGTC GTGGGGTAA
 
Protein sequence
MRIGNRVLPL PDPVAWVRGL LAPAAEIRTH DAASAYHEYR TRLVSPLMRR ILLVNALPLM 
LLALTLLYLN QFQNSLLEAE VTALREQARI YAGALGQSAV VSGRGSDPIL DAPLARPLLL
RLTEPSPAAH ARLFAPDGQL VADSRVEQAA VLHRGTRGQI ESQPLPSPVA ADDGDDRAAG
AMANAGFAER FYDRLLSLLP TLSGARIVTL DTPDTDPSVQ PVMGADGQST PEMPPYIRRT
ANRHLIVTVA EPVMHDGQTI GIIQLTRQAR DVDRSLFAVR SSILSLVLIA LAITVLLSWY
LSLTIARPLL RLAASAHVIR ESHGRSDTVP PRLLARRDEI GEVARALQDS ARALWARMDA
IERFAADVSH EIKNPLSSIR SAIETLVRIE DLNRQRRLLS IINDDVRRLD RLITDISDAS
RVDAELSRTR TEPVGVVPIL SVLAEIHQAT RAPGQPILAI SVTAADRSLT VQAVEDRLVQ
VLRNLIGNAI SFSPPDGRIT LSAVPAAGGM VDIAVADEGP GIPAAKLNSI FDRFYSERPT
TENFGQHSGL GLSISRQIVE ALKGTIRAEN RVGTDGRVVG ARFVVTLPRV VG