Gene Gdia_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1903 
Symbol 
ID6975326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2118230 
End bp2118715 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID643391429 
ProductHPr kinase 
Protein accessionYP_002276278 
Protein GI209544049 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.806436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.279054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGT ATCCATCGCA GAAGAATCAG ATTCATGCCG GCTGTGCCGC TAGGCGCGGC 
CCCCGGGGGG TAGACGGCCA CCAAACGGAC AGCCAGGGCG TGCTGCTGCT GGGGCCGCCG
GGGGCGGGCA AGTCCGACCT GCTGCTGCGG CTGGTCGATG CGGGCTACGA CCTTGTGGCC
GACGACCGGG TGGACCTGGC CGGCGGCTGG GCCTCGGCCC CCGCTGCCCT GGCCGGTCTG
ATCGAGATCC GGGGCATGGG CATCGTGCGC ATGCCCTTCC TGGCGCGGGC GCGGCCCGTG
CTGGTGGTCC GGCTGGTCGG ACCGGACGAC CGGCCCGACC GGTTGCCCCT GCCGGCGCAC
GATCCGGTGA CCGGCCTGCC TGAAATCCGG CTCGATCCGG CGCTGGCCTC GGCGGTGGCG
CGGGTCAATC TGGCTCTTGA CTGCCAGCAT GGACGTTGCA AAATTTTAAC GTCCGAGCAG
ATGTGA
 
Protein sequence
MEPYPSQKNQ IHAGCAARRG PRGVDGHQTD SQGVLLLGPP GAGKSDLLLR LVDAGYDLVA 
DDRVDLAGGW ASAPAALAGL IEIRGMGIVR MPFLARARPV LVVRLVGPDD RPDRLPLPAH
DPVTGLPEIR LDPALASAVA RVNLALDCQH GRCKILTSEQ M