Gene Gdia_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1900 
Symbol 
ID6975323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2116197 
End bp2116520 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content68% 
IMG OID643391426 
ProductPhosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_002276275 
Protein GI209544046 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0610024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGC CCGGCATGTC GGCTCCTGGC GGGCTGGACC CCCAGGACCC CGATGTCCTG 
TCCGTGACCC TGACCATGGT CAATCGTCGC GGGCTGCATG CGCGCGCGGC GGCCAAGCTG
GTGACGGTGG CCGAGCAGTT CGACGCGAAT GTCGAGGTCA CGCGGGCCGA CCAGACCGTA
TCGGCGCGCT CGATCATGGG CCTGATGATG CTGGGGGCCG GTCGGGGGGA ATCCATTACC
CTGATGGCCA CGGGATGGGA TGCCCATGCG GCGATCGAGG CCCTGGTGGC CCTGATCGAG
GCGGGCTTCC ATGAAGACGA CTGA
 
Protein sequence
MSSPGMSAPG GLDPQDPDVL SVTLTMVNRR GLHARAAAKL VTVAEQFDAN VEVTRADQTV 
SARSIMGLMM LGAGRGESIT LMATGWDAHA AIEALVALIE AGFHEDD