| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1733 |
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| Symbol | |
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| ID | 6975148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1915271 |
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| End bp | 1917253 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643391257 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_002276114 |
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| Protein GI | 209543885 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA CCAAGATCCT CTGGGGTTCG GTGTTTGCCG TCAGCACCGT GATCCTCGCC
TTCACCTGGG CCGCGACGCA GTGGACTGCT TGGCGGCTCG GCTTCCAGCC GCAGCTCGGC
GCCCCGTGGT TCACGCTGGT CGAGTGGCCG GTCTATTATC CGCCAGAATT CTTCTGGTGG
TGGTTCGCCT ACGACGCCTA CGCCCCGGAC ATCTTCACCA TCGGCGGCTA TATCGCGGCC
TCGGGTGGGA TCGCCGCCGT CATCGTCGCG ATCACTCTGT CCGTCTGGCG TGCCCGTGAA
AAGAAACGCG CTACCACCTA CGGCTCGGCG CATTGGGCCG ACCCGCGCGA GATCCGTCGC
GCCGGGCTGC TCGCTCCCGA TGGGGTTGTG CTGGGTCGCT CGGCTGATGC CTATCTCCGT
CATGATGGGC CGGAGCATGT GCTGTGCTTT GCACCGACCC GCTCGGGCAA GGGCGTCGGT
CTGGTGGTGC CGACGCTGCT GACCTGGCCG GGCGCGGCCA TTGTCCATGA CATCAAGGGC
GAGAACTGGG CGCTGACCGC GGGCTGGCGT TCGCGCTTCG GCCGGGTGCT GCTGTTTGAT
CCGACCAACC TTGCCAGCGC GGCCTACAAT CCGCTGCTGG AGGTCCGGCG CGGCGAGCGC
GAAGTCCGCG ACGTGCAGAA CATCGCCGAT GTGCTGGTCG ATCCCGAGGG CGCCCTGGAG
AAGCGCAACC ATTGGGAGAA GACCAGCCAC GCCCTGCTGG TCGGTACCAT CCTGCATGTC
CTCTACGCCG AGGAGGATAA AACCCTGGCC GGGGTCGCCA ATTTTCTCTC CGACCCCAAG
CGGGCGATCG AGACCACGCT GCGCGCCATG ATGACCACGC CGCATCTCGG CGCGAAGGGC
GTGCATCCGG TGGTGGCAAG TTCGGCGCGG GAACTGCTGA ACAAGAGCGA TAACGAGCGC
TCGGGCGTCC TCTCCACTGC GATGTCGTTC CTTGGCCTCT ATCGCGATCC GGTCGTGGCC
CATGTGACGC GCCGCTGCGA CTGGCGCATT CGCGATCTTG TCGCCGGCAC CCATCCGGCG
ACGCTCTATC TGGTGGTGCC CCCTTCGGAC ATCAGCCGCA CCAAGCCGCT GGTCCGCCTG
GTGCTGAATC AGATCGGCCG CCGGCTGACC GAGGAACTGG AGGCAAAACG CCGCCATCGG
CTGCTGCTGA TGCTTGATGA GTTCCCGGCG CTGGGGCGGC TGGATTTCTT CGAGAGCGCT
CTGGCTTTCA TGGCAGGCTA TGGGATCAAG AGCTTTCTGA TTGGCCAGAG CCTGAACCAG
ATCGAGAAAG CCTACGGCCA GAACAATTCG ATCCTCGACA ATTGTCATGT CCGGGTCAGC
TTCGCGACCA ATGACGAGCG GACCGCCAAA CGGGTGTCCG ATGCACTCGG CACCGCGACC
GAGATCCGGG ACGCAAAGAA CTATGCCGGG CATCGTCTGT CGCCGTGGCT GGGGCATCTG
ATGGTAACGC GTCATGAGAC GGCACGCCCG CTATTGACGC CGGGCGAGAT CATGCAGCTT
CCGCCTGACG ACGAACTGGT GCTGGTGTCT GGTTGGCCGC CGATCCGGGC GCGCAAGGCG
CGTTATTTCG ACGATGCCGA ACTGAATGCG CGTATCCTCC CGCCACCCCG GTTTGAGCCG
CCGTCGTCTC CGGAGGGAAC GCCGCCCATT GGACCGCAGC CGGCGGGGGA CTGGGCCGAC
GTGGTGCAGC CGACGACGCC GGGCAACGGA GACGACGACC CCGCCAATGC CGGCATTCGC
CGGGAGCCGG AACTGCCGGA GCAGGAGGAG GTGGTGCAGG CACCGAGGAC GCCGGTCCAT
GAATTTGACC CACCCGAGGG AGACCCGGAG GATGATGCCA CACGGGCACA GACCCTGCGA
CGCGGGGAGC GGGCGCTCGC GCGGCAGGTG TCGCTCGATC CTGGCGACCG GATGGGCCTG
TGA
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| Protein sequence | MNQTKILWGS VFAVSTVILA FTWAATQWTA WRLGFQPQLG APWFTLVEWP VYYPPEFFWW
WFAYDAYAPD IFTIGGYIAA SGGIAAVIVA ITLSVWRARE KKRATTYGSA HWADPREIRR
AGLLAPDGVV LGRSADAYLR HDGPEHVLCF APTRSGKGVG LVVPTLLTWP GAAIVHDIKG
ENWALTAGWR SRFGRVLLFD PTNLASAAYN PLLEVRRGER EVRDVQNIAD VLVDPEGALE
KRNHWEKTSH ALLVGTILHV LYAEEDKTLA GVANFLSDPK RAIETTLRAM MTTPHLGAKG
VHPVVASSAR ELLNKSDNER SGVLSTAMSF LGLYRDPVVA HVTRRCDWRI RDLVAGTHPA
TLYLVVPPSD ISRTKPLVRL VLNQIGRRLT EELEAKRRHR LLLMLDEFPA LGRLDFFESA
LAFMAGYGIK SFLIGQSLNQ IEKAYGQNNS ILDNCHVRVS FATNDERTAK RVSDALGTAT
EIRDAKNYAG HRLSPWLGHL MVTRHETARP LLTPGEIMQL PPDDELVLVS GWPPIRARKA
RYFDDAELNA RILPPPRFEP PSSPEGTPPI GPQPAGDWAD VVQPTTPGNG DDDPANAGIR
REPELPEQEE VVQAPRTPVH EFDPPEGDPE DDATRAQTLR RGERALARQV SLDPGDRMGL
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