Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1540 |
Symbol | |
ID | 6974950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1716047 |
End bp | 1717858 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643391071 |
Product | ABC transporter related |
Protein accession | YP_002275934 |
Protein GI | 209543705 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.798313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTCGC TTGCCGAACT GCCCATCATC TCCCTCTCCG GCCTGAAGAT CACCGGCCGG CGTCCCGGCG AGCCCGAGAC GGTGATCGTC GACGGCATCG ACCTGACGGT CCAGCGGGGC GAAGTCATCG CGCTGATCGG CGAATCCGGG TCCGGCAAGA CCACGATCGC GCTCGCACTG CTGGGCTACG CGCGCCAGAA CTGCCGTATC GCCGGGGGCA CGATCACCGT CGCGGGGTAC GACGTGCATG CGATGGGCCC GGCGGCGCTG CAGAAGATCC GCGGCCGCAC CGTCGCCTAT GTCGCGCAGA GCGCGGCCGC GTCGTTCAAC CCGGCCAAGC CGATCATGAC GCAGGTCATC GAGGCCGCGC ACCTGCACGC CACGATGCCG CGGCGCGAGG CGGAGGCCCG CGCGGTGGAA CTGTTCCGGC TCCTGGCCCT GCCGGACCCG GACAATGTGG GGCGGCGCTA CCCGCACGAG GTATCGGGCG GGCAGTTGCA GCGCCTGCTG GCGGCCATGG CGCTGATCAC CGACCCCGAG ATCATCATCT TCGACGAACC GACGACCGCG CTGGACGTCA CCACGCAGAT CGAGGTGCTG GCCTCGTTCA AATCCGTGGT CAAGGCCCTG AACATTACCG GCATCTACGT CTCGCACGAC CTGCCGGTGG TGGCGCAGGT CGCGGACCGG GTGGTCGTGC TGCGCCACGG CACGATCCAG GAAATCGCGC CCGTCCGGCA GATCCTGGAG GCCCCGGCCC ACCCCTATAC CCGCGCGTTG CTGAAGGCCG CGTCCCCCGT GGCGCGCGAC CGCCCGCCGT CGGAACGACA GGCCCCGGTC CTGGCGGTGT CGGGGCTGGT GGCCGGCTAT GGGGGGCTCG ATCCGCGGGG CTATCCCGTC GTGCCGATCG TCGATGGCGT GACGTTCACG CTCGGGCGCG GCAGGACGCT GGGCATCATC GGCGAATCCG GGTCCGGCAA AAGCACGCTG GCGCGGACCA TCGCCGGGTT CCTGCCCGCG GCCCGGGGCA CCGTCATGCT GAACGGGACC CCTCTGGCCC CCGACCTCGC CCACCGGTCG CGCGAGGAAA AGCGCCGCAT CCAGATGGCG TTCCAGATGG CGGATACCGC GCTCAACCCC CGCCAGCCGA TCAGGACCAT CCTGTCCCGC CCGTTGCAGC TCTATCACGG CATGCAGGGG GCGGCGCTGG ATGCGGAAAC CCGGCGCATG CTGGACCTGG TGAAGCTTCC GGCGGCGATG GCCGGCCGCC TGCCCGGCGA ATTGTCCGGC GGGCAGAAGC AGCGGATCAA CCTGGCCCGC GCGCTGGCGG CGCGGCCCGA CGTGCTGCTG TGCGACGAAA TCACCTCCGC GCTGGATACG GTGGTGGCGC AGGCCGTGCT CGACCTGCTG CGGGACATCC AGCGCGACCT GGGACTGTCC TGTATCTTCA TCACGCATGG GCTCGAAACC CTGCGCTCGG TCTGCGACGA CGTCATGGTC CTGTATCGCG GGCGCACGGT CGAGGTCACG CCCCGCGCGG CATTGGGCGA TCCGGTCCAT CATCCCTACA CCACCCTGCT GACCGGTTCG GTGCCCGAAT TGCGGCCCGG TTGGCTGGAG GATATCCGCG CCGCCCGCGC GCTGGACCGC CCGGCCCCGA TGGCGGATGC CTCGGGGGGC GCGGACGTTC GCGCGCTCTG CCCGTTCCTC GATCGCTGTC CGGTGCGCCT CGATGCCTGC CGGACCGCGC CGCCTCCCGT GCGGCACAGT CCGGCCGGGG CGGATATCCT CTGTCATCGC CAGATGCCGT AG
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Protein sequence | MKSLAELPII SLSGLKITGR RPGEPETVIV DGIDLTVQRG EVIALIGESG SGKTTIALAL LGYARQNCRI AGGTITVAGY DVHAMGPAAL QKIRGRTVAY VAQSAAASFN PAKPIMTQVI EAAHLHATMP RREAEARAVE LFRLLALPDP DNVGRRYPHE VSGGQLQRLL AAMALITDPE IIIFDEPTTA LDVTTQIEVL ASFKSVVKAL NITGIYVSHD LPVVAQVADR VVVLRHGTIQ EIAPVRQILE APAHPYTRAL LKAASPVARD RPPSERQAPV LAVSGLVAGY GGLDPRGYPV VPIVDGVTFT LGRGRTLGII GESGSGKSTL ARTIAGFLPA ARGTVMLNGT PLAPDLAHRS REEKRRIQMA FQMADTALNP RQPIRTILSR PLQLYHGMQG AALDAETRRM LDLVKLPAAM AGRLPGELSG GQKQRINLAR ALAARPDVLL CDEITSALDT VVAQAVLDLL RDIQRDLGLS CIFITHGLET LRSVCDDVMV LYRGRTVEVT PRAALGDPVH HPYTTLLTGS VPELRPGWLE DIRAARALDR PAPMADASGG ADVRALCPFL DRCPVRLDAC RTAPPPVRHS PAGADILCHR QMP
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