| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1496 |
|---|
| Symbol | |
|---|
| ID | 6974906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1673781 |
|---|
| End bp | 1674461 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643391027 |
|---|
| Product | beta-Ig-H3/fasciclin |
|---|
| Protein accession | YP_002275890 |
|---|
| Protein GI | 209543661 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.768836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.638636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCGG CGCGCATCGT AGGGTCCTGT CTTCTTCTTG CCGGGCTGCC GGCGGCATGC
GCCGCGCCGG CCCGGCAGGA CCCGCTGCTG GTGCGTGGCG GCAGCGTGGC CGACGCCATC
CCGACCGTGT CCGTGCAACG GACCTACGCG CCGGCCCGGA ACGAGGGGCG CCCGGACAGC
CAGGTGGCCT ATGGCGCCCC GGACGCGCCC AGCTACCGCG ACCGGCCGCT GGACGAAAAT
CTGCGCGGCA GCATCGAACT GGCCGATTAT GTCCGGGCCA TGGAACGCGC TGGGCTGATG
GCGCTGCTGG ACCAGGCGGG CCCCTTCACC GTCTTCGCCA TTCCCAATAT CCCGATGGAG
GCGTTCGCCC AATCCACCAA TGCGCCGTCG GCCGCGTCGG GGGACGTGCT GCGCCAGGCC
CTGGGCTACA GCGTCGTGCG GGGGGCCTAT CCCGCGCCGC TGCTGCGGCG GATGATTGCT
GCGGCGCCGC ACGGCTGGGC CACGCTGCGG ACGGTGGGGG GTGGCACGGT CCTGGTCGGG
GCCGAACCGG GGACCGGCCG TCTGGTCCTG TCCAACGGCG CGGGCCAGGT CGCGCGCGTG
TGGATCGAGG GCCTGCCGCA ATCCAACGGC GTGCTCTACC TGACCCAGTC CCTGCTGCCG
CCGGCGCCCC GGCCCGGCTG A
|
|---|
| Protein sequence | MVSARIVGSC LLLAGLPAAC AAPARQDPLL VRGGSVADAI PTVSVQRTYA PARNEGRPDS
QVAYGAPDAP SYRDRPLDEN LRGSIELADY VRAMERAGLM ALLDQAGPFT VFAIPNIPME
AFAQSTNAPS AASGDVLRQA LGYSVVRGAY PAPLLRRMIA AAPHGWATLR TVGGGTVLVG
AEPGTGRLVL SNGAGQVARV WIEGLPQSNG VLYLTQSLLP PAPRPG
|
|---|
| |