| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1184 |
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| Symbol | |
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| ID | 6974588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1320409 |
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| End bp | 1322505 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643390713 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002275582 |
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| Protein GI | 209543353 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.595122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTG TCGTCGTCGT TGATGACGGT TCCGCCACCC GGACGATCCT CGCGCGGATG
GCCATGACGC TCGGCGCGGA CATCCAGGTC GAAGCCTTCG CTTCCCCGAT CGAGGCGCTG
GACTGGTTTG GGGACACGAA TATCCCCGAT CTGGTCATTG CCGATTGCAG AATGCCGATG
ATGGACGGGG CGGCTTTCAC CGCGCGCATC CGCGCCCTGG GCTGGGGCGG CGATGTGCCG
GTGATGGTCG TGACGGCCCA GGAAGACCGC GAGGGTCGTA TCAGCGCGCT GGCGGCCGGG
GCCACCGATT TCCTGTCCAG CCCCGTCGAT CACACGGAAT TCCTGACCCG GGCCCGCAAC
CTGCTGCAAC TGGGCTGGCA CCAGAAGCGC GCCCGCTCGC CCGTGCAACT GGAGCAGGAA
CTGGAAAACA GCCGGGCCGC GCAGGCCGAA ATCCTGCGCG GCAGCCGCGA CCGCCTGCTG
CAGGTCATCG ACACGGTGCC CGCCCTGGTC AGCGCCACGG ACGCCGAGGG GAATTACATC
TTCGTCAACA GATTCCATGC CCGGGTGATG GGGGCAGGGC AGGGGCGTAA CGATGCGGCA
TCGCAGCTCC GCGACAGGCA GGTGCTGGAA ACCGGCCTGC CCACCGCGCG GTACGAGGAA
AGCATTGCCG ACCGGTACGG CATGGAACGT ATCCTGCTGA CGTCCAAGAT CCCGTTTTAT
GACGACGCCA GCGGTATGCG GTACGTCCTG ACCACGTCGC TCGATATCAC CGACCGGAAG
AAGGCCGAGC GGGAACTGCA TCATCTGGCC TATTATGACC AGTTGACGGG TCTGCCCAGT
CGCTCGAAGC TCGAGACCGA GATGCAGGTG CTGCTGCGGC AGCGCGGGGC GGACGGCCCC
CCTTTCGCGT TTGTGCTGAT GGACCTCGAC CGGTTCAAGG GCATCAACGA CACGCAGGGC
CATACGATCG GCGACCTGTT GCTGCGCAAG GTCGCGCTCC GGCTGCGGAC GGCGCTGCCC
CGGGCCGGAA TCATCGCGCG CCTGGGCGGG GACGAATTCG CCATCGTGCA TGACGTCATC
GACGCGGCGG ACGCGGCGCA CATGGCGGAG CGGATCGTGG GGATCTTCGC CCGTCCCTTC
ACCCTGGGCG ACCGGGTCAC GAGCGTCGGC GCCAGTGCGG GGGTGACGCT GTTCCCTGCC
CGCGGCGCGA CGTTCGAGAC GCTGCTCAAG CGCGCGGATC TGGCGATGTA CCGTGCCAAG
AACGAGGGAC GCTGCCGCTA CGCCTTTTTC GACGAGGAAA TGGAACAGGC CTTCGCGGCC
ACGACCGAAC TGGAGCAGGC ATTGCGCCGC GCGGTGGAGA ACGAGGAATT CGTCCTGCAT
TATCAACCCC AGATCGATCT GGCCTCCGGC ACCTTATGCG GGGTCGAGGC CCTGATCCGC
TGGGTGCAGC CGGGGGGCGA CCTGGTCCAT CCGGGCTGCT TCCTGCCGCT GGCCGAGGAA
ACCGGGCTGA TCGCGCCCAT GACGGTGTGG TCCCTGCGCG AGGCCTGCCG CCAGGCGGCG
CGATGGCAGA GCGACGGCAT TCATATCCGT GTCGCGGTCA ACCTGTCGGG CGTCCTGTTT
CGCCAGCATG ACGTCCATCG ACTGGTGGTG GACGCCACGA CGGAAGCCGG CCTGGACCCG
TCCTTCCTTG AACTGGAACT GACCGAAACC GCGGTGATCG AAAACCCCGA ATCCGCCGGG
CGGCAGCTTG CCGCCCTGCA GCAGATGGGC GTGTCGGTCG CGATAGACGA TTTTGGAACC
GGCTATGCCT CGCTGGTCTA TCTGACCAGG CTTCCGATCC ACCGCCTCAA GATCGATCGC
GTCTTCATCC AGGACCTCGG TTCGTCACCG GGCAGCCGGG CCATTGTCAA GGCGATCATC
GCGCTGGGCA AGAACCTGGG AATCCGCGTC ATCGCCGAGG GGATCGAGCG CCAGGACCAG
CTCCGCTGGC TGGAAGAGCA GGACTGCCAA GAGGCCCAGG GCTTCTATTT CGGCTATCCT
GTTCCACCGG CGAAACTTCA GGACCTGGTG GATAGCGGGA CCCTGATGGT GCCTTAG
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| Protein sequence | MRLVVVVDDG SATRTILARM AMTLGADIQV EAFASPIEAL DWFGDTNIPD LVIADCRMPM
MDGAAFTARI RALGWGGDVP VMVVTAQEDR EGRISALAAG ATDFLSSPVD HTEFLTRARN
LLQLGWHQKR ARSPVQLEQE LENSRAAQAE ILRGSRDRLL QVIDTVPALV SATDAEGNYI
FVNRFHARVM GAGQGRNDAA SQLRDRQVLE TGLPTARYEE SIADRYGMER ILLTSKIPFY
DDASGMRYVL TTSLDITDRK KAERELHHLA YYDQLTGLPS RSKLETEMQV LLRQRGADGP
PFAFVLMDLD RFKGINDTQG HTIGDLLLRK VALRLRTALP RAGIIARLGG DEFAIVHDVI
DAADAAHMAE RIVGIFARPF TLGDRVTSVG ASAGVTLFPA RGATFETLLK RADLAMYRAK
NEGRCRYAFF DEEMEQAFAA TTELEQALRR AVENEEFVLH YQPQIDLASG TLCGVEALIR
WVQPGGDLVH PGCFLPLAEE TGLIAPMTVW SLREACRQAA RWQSDGIHIR VAVNLSGVLF
RQHDVHRLVV DATTEAGLDP SFLELELTET AVIENPESAG RQLAALQQMG VSVAIDDFGT
GYASLVYLTR LPIHRLKIDR VFIQDLGSSP GSRAIVKAII ALGKNLGIRV IAEGIERQDQ
LRWLEEQDCQ EAQGFYFGYP VPPAKLQDLV DSGTLMVP
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