Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1059 |
Symbol | |
ID | 6974456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1186452 |
End bp | 1188509 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643390581 |
Product | ParB domain protein nuclease |
Protein accession | YP_002275457 |
Protein GI | 209543228 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAGCG CCATCCAGAA AATCGCCCTC AATGTGTCCC GTGATATCCC TTTCAACAAA CTGGTGCTGT CGCAGTCCAA CGTGCGGCGT GTGAAGGCCG GCCTGTCGAT CGAGGAACTG GCCCGCGATA TCGAACGTCG TGGGCTGCTT CAGAGCCTGA ACGTCCGGCC CATTCTTGAC GATGCCGGTG TCGAGACCGG TACCTATGAG GTGCCGGCCG GCGGACGCAG GTTCCGCGCC CTTGAGCTGC TGGTGAAGCA GAAGAAGCTG GCGAAGACCG CCTCCGTACC TTGTGTCGTG CGCGAGGCCG GGTCAGCCAT TCTCGCCGAG GAGGACTCCC TGGCCGAGAA CGTCCAACGC GTGGCCCTGC ATCCGCTGGA CCAGTTTCGT GCCTTTCGCG ACATGCTGGA GAAGGGCATG TCCGAGGACG AGATCGCTGC CGCGTTCTTC GTCGTGCCGA CTGTGGTGAA ACAGCGCCTG CGCCTGATGA CCGTGTCCGA CAAACTGCTC GATATTTACG AGCAGGATGG CATGAAGCTG GACCAGCTCA TGGCCTTCTC GATCAGCGAT GACCATGACA GGCAATTACA GGTCTGGGAG ATCGTCTCCC AGAGCCACAA CCGCGAGCCC TATCTGATCC GCCGCATGCT GACGGAGAAA ACCGTGCGGG CATCAGATCG CCGCGTGCGC TTCGTCGGGC TGGAGGCTTA TCTGGCGGCA GGTGGTTACA TCATGCGTGA CCTGTTCGAG GCTGACGATG GCGGCTGGCT GCAGGATCCG ACCCTGCTCG ACCGGTTGGT CATGAACAAG TTGCAGGAGG CGGCTGAACA GGTCCGCGCC GAAGGCTGGA AATGGGTCGA AACGGCCTTG TCCTTCCCCT GGGGGCACAC ACGGGACTTT GCGGAGATTG ACGGGACGCC CGTCGTGCTT TCGGACGAAG AAGCGGCCCG TCTGACTGCG CTGCACAGCG AGCAGGAAGC CATTGAGGCG GAATACGCGC AGGAGGATGA ATTCCCCGAA GAGATCGATA CCCGGCTGGG GGAAATCGAA CAGGCCATTG AGGCGCTGGA AGAACGCCCG GTGTCCTTCG ATCCGGGGGA CATGGCGCGG TCTGGCGTCT TCGTTAGCCT GGATACCGAC GGCACTCTGC TGGTCGAACG GGGTTTCGTT CGGCCGGAAG ATATGCCGGT CGAACCTGAA GTCGATCACG ACGAATCAGA CGGATATGAC GACGCCATTG ACCATCGCGG CGATGGCGAC GATGCCGAAG GGAATGGGAG GGAAGGCGCA CCCGACATCG AGCCCGAGGA GGAAGACGGG CTGAAGCCGC TTTCGGACCG CCTGCTGACC GAACTGACGG CGTGGCGGAC ACTGGCCCTG CGGGATGCTT TCGCGGCCAA TCCGCACATC GCGCTGACGG AACTGCTGCA CTCGCTGGTT CGCGACCTCT ACTGGCAGGT CTCGGGTGTG GATTGCCTGG AAGCCTATGT TCGGGAAATC CCGCTGCCGG TTCATTCGCC TGACATGCCC GGCAGCCTGC CGGCCCACGC GCTGCGCCAG CGCAACGAGG GCTGGAAGCA CGATCTGCCG GAAGATGAAG ACGCACTATG GCAGTGGCTC GACGGGCTGG ACGACACCAG CCGTCTGGCC CTGCTGGCGC ATTGCCTGTC CTTCGGGGTC AACGCGCTGC ATGAATCGTC CCATGGTCCG TCTCTGGCAC GCAGCGTCAG GGAGAGGCTT GCGCGAGCTG GCCGTCTCGC CACGGCGCTC AGGCTCGACC TGGTCGAGGC GGGCTGGCAG CCAACAGTGG AGAACTATCT CGGCCGCGTC ACCAGGGCTC GTATCCTTGA AGCCGTGCGT GGGGCGCGGG GTAACGAGGC CGCCGACCGC ATCGCCCATA TGAAGAAGGG CGACATGGCG CAGGCTGCCG AGCGGCTTCT GGACGGTTCG GGCTGGTTGC CAGAGGCACT GCGGACTAGG AACGTGGCGG GACGGAATGC AGGAGAAGCA GGAACGGCTG ACATGTCCGA CAACCCGGAC GCGGTGGCGG CCGAGTGA
|
Protein sequence | MASAIQKIAL NVSRDIPFNK LVLSQSNVRR VKAGLSIEEL ARDIERRGLL QSLNVRPILD DAGVETGTYE VPAGGRRFRA LELLVKQKKL AKTASVPCVV REAGSAILAE EDSLAENVQR VALHPLDQFR AFRDMLEKGM SEDEIAAAFF VVPTVVKQRL RLMTVSDKLL DIYEQDGMKL DQLMAFSISD DHDRQLQVWE IVSQSHNREP YLIRRMLTEK TVRASDRRVR FVGLEAYLAA GGYIMRDLFE ADDGGWLQDP TLLDRLVMNK LQEAAEQVRA EGWKWVETAL SFPWGHTRDF AEIDGTPVVL SDEEAARLTA LHSEQEAIEA EYAQEDEFPE EIDTRLGEIE QAIEALEERP VSFDPGDMAR SGVFVSLDTD GTLLVERGFV RPEDMPVEPE VDHDESDGYD DAIDHRGDGD DAEGNGREGA PDIEPEEEDG LKPLSDRLLT ELTAWRTLAL RDAFAANPHI ALTELLHSLV RDLYWQVSGV DCLEAYVREI PLPVHSPDMP GSLPAHALRQ RNEGWKHDLP EDEDALWQWL DGLDDTSRLA LLAHCLSFGV NALHESSHGP SLARSVRERL ARAGRLATAL RLDLVEAGWQ PTVENYLGRV TRARILEAVR GARGNEAADR IAHMKKGDMA QAAERLLDGS GWLPEALRTR NVAGRNAGEA GTADMSDNPD AVAAE
|
| |