| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1010 |
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| Symbol | |
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| ID | 6974407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1136493 |
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| End bp | 1138919 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643390532 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_002275408 |
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| Protein GI | 209543179 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.611754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC TTGCCGAATA CCGCCATCGC CGTGACCGGC TGGCCGATTT CCTGCCTTGG
GCGGCGCTGG TCGCCCGGGG CGTGGTGCTG AACAAGGATG GCGCCTTCCA GCGCACCGCG
CGCTTTCGCG GCCCGGACCT GGACTCCTCG ACCGTGTCCG AACTGGTCGC GATCACGTCG
CGGCTGAACA ATGCCCTGCG CCGTCTCGGT TCGGGCTGGG CCATGTTCGT CGAGGCGCAG
CGCCGTCCGG CGCGCGGCTA TCCCGCCAGC CCGTTCCCAG ATCCGGCCTC CAAACTGGTC
GACGCCGAAC GGCGGGCACA GTTCGAGGAA GAGGGCGCCC ATTACGAGAG CCGCTATTTC
CTCACCCTGG TCTGGCTGCC GCCGGCGGAC GATGCCGCGC GCGCGGAAGC CTGGCTTTAC
GAAAACCGCG CCCGTGGCGG TTCCGACTGG CAGGCCGTGG TCGCGGGATT CATCGATCAG
ACCGACCGGG TGCTGGCCCT GCTCGACGGC TTCATGCCTG AAGCCGACTG GCTCGATGAC
GGCGAAACCC TGACGTATCT CCACTCCTGT ATCTCGACGC GCCTGCAGCG GGTGCGGGTG
CCGGAAATCC CGATGCACCT CGACGCCATC CTGGTGGACG AGGCACTGAC CGGCGGGCTG
GAGCCGCGCC TGGGTGACGC CCATCTGCGC ACGCTCACCA TCACCGGTTT CCCGACCCAG
ACCTGGCCGG GGCTGCTGGA CGAGCTGAAC CGGCTGGCCT TTCCCTATCG CTGGGCGACG
CGGGCGATCT GCCTCGATCG CACCGACGCG ACGAAAGTGC TGGGCCGGAT CCGCCGGCAA
TGGTTCGCCA AGCGCAAATC GATCATGGCC ATCCTCAAGG AGGTGATGAC CAACGAAGCC
TCGGTGCTGC TGGATTCCGA TGCCGCCAAC AAGGCCGCCG ACGCCGATGC GGCGTTGCAG
GAACTCGGTA CCGACCAGGT CGGACAGGCC TATGTCACCG CCACCGTCAC GGTGTGGGAC
GAAGACCCGA CTATCGCCGC TAATCGGCTG CGGCTGGTGG AGAAGACCAT CCAGGGCCGC
GACTTCACCT GCATGCGCGA GACGGTGAAT GCGCTCGAAG CCTGGTTCGG CAGTCTGCCG
GGCCATGTCT ACGCCAATGT CCGCCAGCCC TGCGTCTCCA CCCTGAACCT GGCGCACATG
ATCCCGCTCT CCGCCGTGTG GGCGGGGCCG GAGCGTGACG GGCATTTCGA CGCGCCACCG
TTATTTTATG CCCGTACTGA AGGCTCGACC CCGTTCCGCT TTGCACTCCA CGTCGGAGAT
GTCGGCCACA CGCTGATCGC CGGGCCGACC GGGGCCGGCA AGTCGGTGCT GCTGGCCTTC
ATGGCGATGC AGTTCCGTCG CTATGCAAAC GCCCGGATCT TCGCCTTCGA TTTCGGCGGC
TCGATCCGCG CGGCGACCCT GGCAATGGGC GGGGACTGGC ACGATCTCGG CGGCGCGCTG
GCGCAGGACG GGAACGATCC CGTCGCGTTG CAGCCGCTGG CGCGGATCGA CGAGCCGGGC
GAACGGGCCT GGGCGGCGGA GTGGGTGGCG AGCCTGCTGG AGCGCGAGGG CGTCACTGTC
GCGCCCGATC TCAAGGAGCA TCTGTGGTCG GCACTGACCT CGCTGGCCTC GGCCCCGGTT
GCGGAACGCA CCATCACCGG CCTGTCGGCG CTGCTCCAGT CGCTGGCCTT GAAGCAGGCA
TTGCAGCCCT ACTGCGTTGG TGGCCCATGG GGCAGTCTGC TCGATGCTGA GCACGAGCGG
CTGGGCGTCG CCGATATCCA GGCCTTCGAG ATCGAGGGTC TGATCGGCTC GGGTGCCGCG
TCCGCCGTGC TGTCTTATCT GTTCCATCGT ATCGAGGACC GGTTTGACGG CAGCCCGACG
CTGCTGATCA TCGACGAGGG CTGGCTGGCG CTGGATGATC GCGCTTTCGC CGGGCAGTTG
CGGGAATGGC TGAAAACGCT GCGCAAGAAG AACGCCTCCG TCATCTTCGC CACCCAGTCA
TTGGCCGATA TTGACGCCAG CCCGATCGCG CCCGCCCTAA TCGAAAGCTG CCCGACCCGG
ATCTTCCTGC CCAATGACCG GGCGCTGGAG CCGCAGATTA CCACGATCTA TCGCCGCTTC
GGGCTGAACG ACCGCCAGAT CGAGTTCCTC AGCCGGGCTA CGCCCAAGCG CGATTATTAC
TGCCAGTCTC GGCGGGGCAA CCGGCTGTTC GATCTCGGCC TGTCCGAAGT GGCGCTCGCC
TTTACCGCCG CGTCGTCGCC CGACGACCAG GCCGCCATCG ACCGGATATT TGCCCGGCAT
GGGCGCGACG GGTTCGCGGC GGCATGGCTC ATGCACAAAG GTGTTGAGTG GGCGGTGGAG
ATGCTCAATC CGGGAGAAGG TTCATGA
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| Protein sequence | MMNLAEYRHR RDRLADFLPW AALVARGVVL NKDGAFQRTA RFRGPDLDSS TVSELVAITS
RLNNALRRLG SGWAMFVEAQ RRPARGYPAS PFPDPASKLV DAERRAQFEE EGAHYESRYF
LTLVWLPPAD DAARAEAWLY ENRARGGSDW QAVVAGFIDQ TDRVLALLDG FMPEADWLDD
GETLTYLHSC ISTRLQRVRV PEIPMHLDAI LVDEALTGGL EPRLGDAHLR TLTITGFPTQ
TWPGLLDELN RLAFPYRWAT RAICLDRTDA TKVLGRIRRQ WFAKRKSIMA ILKEVMTNEA
SVLLDSDAAN KAADADAALQ ELGTDQVGQA YVTATVTVWD EDPTIAANRL RLVEKTIQGR
DFTCMRETVN ALEAWFGSLP GHVYANVRQP CVSTLNLAHM IPLSAVWAGP ERDGHFDAPP
LFYARTEGST PFRFALHVGD VGHTLIAGPT GAGKSVLLAF MAMQFRRYAN ARIFAFDFGG
SIRAATLAMG GDWHDLGGAL AQDGNDPVAL QPLARIDEPG ERAWAAEWVA SLLEREGVTV
APDLKEHLWS ALTSLASAPV AERTITGLSA LLQSLALKQA LQPYCVGGPW GSLLDAEHER
LGVADIQAFE IEGLIGSGAA SAVLSYLFHR IEDRFDGSPT LLIIDEGWLA LDDRAFAGQL
REWLKTLRKK NASVIFATQS LADIDASPIA PALIESCPTR IFLPNDRALE PQITTIYRRF
GLNDRQIEFL SRATPKRDYY CQSRRGNRLF DLGLSEVALA FTAASSPDDQ AAIDRIFARH
GRDGFAAAWL MHKGVEWAVE MLNPGEGS
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