Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0856 |
Symbol | |
ID | 6974253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 973590 |
End bp | 974318 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643390385 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002275261 |
Protein GI | 209543032 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.236721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACT CTCTTGAAGG CAAGATCGCG GCCGTGACCG GCGCGGCGTC GGGCATCGGC CTGGAATGCG TCCGTCACAT GATCGATGCG GGCGCTGAGG TCTATCTGCT GGACCGTGAC GCATCCGCGC TGGACAAGGC GGCGGCCGAA CTGGGCGGCA AGGCCCATGC CTGCGTTGTC GACCTGTTTG ACTACCCGAC GGTAGATGCC GCCGTTTCCC GCATCGTCGG CGAGAAAGGG CAACTGGACA TCTTCCATGC CAACGCGGGC GCCTATGTCG GCGGCAACGT CTGGGAAGGA AACCCCGATA GCTGGGACCC GATGCTGCAC CTGAACATCA ATGCGGCATT CCGTTCGGTC CGCGCGGCCC TGCCGCAGAT GATGAAGCAG GAATCCGGCG ACATCATCGT GACCAGTTCC ATCGCCGGCG TGGTCCCGAT CATGGCGGAG CCGATCTACA CCGCATCGAA GCACGCCGTA CAGGCTTTCG TTCATACGGT GCGCCGCCAG GTGGCCCAGT TCGGCATCCG CATCGGCGCG ATCCAGCCCG GCCCCGTCGT GACTCCCCTG CTGAAGGACT GGGACCCGGC GCGGCTAAAG GCCAATATCG AGGCCGGTGC GATGATGGAA GCCAACGAAG TCGCCGAAGC CGTGATGTTC ATGCTGACCC GCCGCAAGGG GGTCATCGTC CGCGACCTGG TGCTTCTGCC GCATCATTTC GACGTATGA
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Protein sequence | MTNSLEGKIA AVTGAASGIG LECVRHMIDA GAEVYLLDRD ASALDKAAAE LGGKAHACVV DLFDYPTVDA AVSRIVGEKG QLDIFHANAG AYVGGNVWEG NPDSWDPMLH LNINAAFRSV RAALPQMMKQ ESGDIIVTSS IAGVVPIMAE PIYTASKHAV QAFVHTVRRQ VAQFGIRIGA IQPGPVVTPL LKDWDPARLK ANIEAGAMME ANEVAEAVMF MLTRRKGVIV RDLVLLPHHF DV
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