Gene Gdia_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0856 
Symbol 
ID6974253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp973590 
End bp974318 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID643390385 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002275261 
Protein GI209543032 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.236721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CTCTTGAAGG CAAGATCGCG GCCGTGACCG GCGCGGCGTC GGGCATCGGC 
CTGGAATGCG TCCGTCACAT GATCGATGCG GGCGCTGAGG TCTATCTGCT GGACCGTGAC
GCATCCGCGC TGGACAAGGC GGCGGCCGAA CTGGGCGGCA AGGCCCATGC CTGCGTTGTC
GACCTGTTTG ACTACCCGAC GGTAGATGCC GCCGTTTCCC GCATCGTCGG CGAGAAAGGG
CAACTGGACA TCTTCCATGC CAACGCGGGC GCCTATGTCG GCGGCAACGT CTGGGAAGGA
AACCCCGATA GCTGGGACCC GATGCTGCAC CTGAACATCA ATGCGGCATT CCGTTCGGTC
CGCGCGGCCC TGCCGCAGAT GATGAAGCAG GAATCCGGCG ACATCATCGT GACCAGTTCC
ATCGCCGGCG TGGTCCCGAT CATGGCGGAG CCGATCTACA CCGCATCGAA GCACGCCGTA
CAGGCTTTCG TTCATACGGT GCGCCGCCAG GTGGCCCAGT TCGGCATCCG CATCGGCGCG
ATCCAGCCCG GCCCCGTCGT GACTCCCCTG CTGAAGGACT GGGACCCGGC GCGGCTAAAG
GCCAATATCG AGGCCGGTGC GATGATGGAA GCCAACGAAG TCGCCGAAGC CGTGATGTTC
ATGCTGACCC GCCGCAAGGG GGTCATCGTC CGCGACCTGG TGCTTCTGCC GCATCATTTC
GACGTATGA
 
Protein sequence
MTNSLEGKIA AVTGAASGIG LECVRHMIDA GAEVYLLDRD ASALDKAAAE LGGKAHACVV 
DLFDYPTVDA AVSRIVGEKG QLDIFHANAG AYVGGNVWEG NPDSWDPMLH LNINAAFRSV
RAALPQMMKQ ESGDIIVTSS IAGVVPIMAE PIYTASKHAV QAFVHTVRRQ VAQFGIRIGA
IQPGPVVTPL LKDWDPARLK ANIEAGAMME ANEVAEAVMF MLTRRKGVIV RDLVLLPHHF
DV