| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0587 |
|---|
| Symbol | |
|---|
| ID | 6973984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 655045 |
|---|
| End bp | 655605 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643390118 |
|---|
| Product | Chloramphenicol phosphotransferase family protein |
|---|
| Protein accession | YP_002274994 |
|---|
| Protein GI | 209542765 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3896] Chloramphenicol 3-O-phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0932492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0000000361338 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGC CGCCTTGCGT CATCATCCTC AACGGTGTCG GCAGCGTCGG CAAGAGTTCC
GTCGCGCGGG CGCTTCAGGG GCTGCTGGAC CGCCCGTTCC TGCATGTCGC GATGGACGAT
TTCGTCTCCA TGCTGCCGCC ACGGATGCTC GATCATCCGG ATGGCATGCA ATTCGTCCCC
GAAACCCGGG ACGGGCATCC CTCGATCGCC ATTCGCGGCG GGGCGGTGAT GGCACGGGCG
ATGCGCGGTA TGCGCCATGC CGTGGCCGCC ATGGCGGGGC AGGGGAACGA CCTGATCGTG
GACGACGTGA TGCTGGATGC GGCCGACGCG CGCGACTATC GGGCGCTGCT GGCGGGCTGC
GTCGTGCATC TGGTCGGGCT GTTTGCGCCG CTGGCGATTT TGGAAGCGCG GGAGCGCGCG
CGGGGTGATC GGCGGATCGG CCTGGCGCGC TGGCAGTATG ATCGGGTGCA TCGCGGCATG
GCGTACGACC TGGAACTGGA CACGGTTCGC ATGACGCCCG GACAGTCGGC GCACAGTATC
CGCGACGCGT TCGGCCTGTA A
|
|---|
| Protein sequence | MDRPPCVIIL NGVGSVGKSS VARALQGLLD RPFLHVAMDD FVSMLPPRML DHPDGMQFVP
ETRDGHPSIA IRGGAVMARA MRGMRHAVAA MAGQGNDLIV DDVMLDAADA RDYRALLAGC
VVHLVGLFAP LAILEARERA RGDRRIGLAR WQYDRVHRGM AYDLELDTVR MTPGQSAHSI
RDAFGL
|
|---|
| |