Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0555 |
Symbol | |
ID | 6973952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 611462 |
End bp | 612808 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643390088 |
Product | phage portal protein, HK97 family |
Protein accession | YP_002274964 |
Protein GI | 209542735 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0158159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0015106 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAATTTC AAACAACACA ATTAGACGGA ATTCTAAGCA GCTTTAAAAG CGCGATTAAC AGTTATGTTG AACCTCCAAT AAATCCCGGC ATTTCTGGCT TTATCGGAAT GATGCCAACG GCTTCTGGTA TCTCGATCAA TGTTGAGAAC ATGCTGCAAT CATCAGCAGT CTCGTCCTGT CTAAGGATAA TAATCGACGA TATCGGAAAG CTTGATATAA ACCTCGAGAT AAAAAATAAA CGAGGTGGAT GGGTGGTTGA TGAAACACCA GACACATTGA GGCTTCTTCG ATATCCGAAT CAAGAAAATG TTATGCAGAC TTTGCTTAAA GCTCTGGTCT TTGATTATCT GACATATGGT AATGCGTATG TTGTCTGTAT TCGAAATCCT GATGGTTCTA CCCAAAAACT TGTTCACGTC AAAGCTAATG GCGTCACGGT AAGAAGAAAT GAAAAGGGCG AGCTTAGATA TACGGCATCG TCTAAAATGT TCATTGGTGA AAGAACCTCT GTAAGATCAG AAGGACCCGA GCAAGAGACT AGATCCATTA GTAATGAAGA CATGATCCAT ATTAAGGATT TCTCAGTCTA TGGTGGGGCA GTAGGAACGT CTATTGTTGA CTATGCCAGA GAGGTTTTTG GGTTGACCAT TGCTGCTCAA GAAACAGCAG CACGGACCTT CAACAATGGT GGGGCTCTAC AAGGGTACTG GAAAACCACA AACGCGAAGG CCGGGAAGAA AACAACTGAG AACGTCCAAG CCGATCTTCA GAATATCATC GGAGGTGTTT CAAACTCGGG AAAAATCTCG GTTATCAACG ATATGGATTA TGTACCCACG AGTATGTCAC CACAGGCTCT TCAACTGATT GAAGCTCGGA ATCAGATGAC TCTAGAGATT GCTCGTCTGT TTCGTGTTCC ACTCCACAAG CTGGGGATGT CTGAAACCGA CAAGGCTGCA AACATCGAAC AGCAGGAAAT TTCTTACATA AACGATACAT TAAAAGCTAT TACGAACAAC ATTGAGTCTT GCTTCAATAG AAAAATATTA TTGGAACGTG ATATAGGAAT AAAAAGGTTT AAATTTGATT TTGAATCTAT GACTTGTCCT GATCTTCAAA CAAGATCTTT GGCTTATACG ACATTAGTTG ACCACGGGCT CATGACACCT GGATTTGCGG CAAATAAGCT TGGGATTCCT GTTCCAGAAG ACGAGGAATA TGCTGATTCA TATCGCGTTC CTCTTAATAT GGGAACGATT GGTGCGAATG AGGATATTCC GTTGTCATTA CAGACACCTG AACCTGAAAA AAAGGTCAGA AAGAGAACAC AAAAAAAGGA GGCATAA
|
Protein sequence | MKFQTTQLDG ILSSFKSAIN SYVEPPINPG ISGFIGMMPT ASGISINVEN MLQSSAVSSC LRIIIDDIGK LDINLEIKNK RGGWVVDETP DTLRLLRYPN QENVMQTLLK ALVFDYLTYG NAYVVCIRNP DGSTQKLVHV KANGVTVRRN EKGELRYTAS SKMFIGERTS VRSEGPEQET RSISNEDMIH IKDFSVYGGA VGTSIVDYAR EVFGLTIAAQ ETAARTFNNG GALQGYWKTT NAKAGKKTTE NVQADLQNII GGVSNSGKIS VINDMDYVPT SMSPQALQLI EARNQMTLEI ARLFRVPLHK LGMSETDKAA NIEQQEISYI NDTLKAITNN IESCFNRKIL LERDIGIKRF KFDFESMTCP DLQTRSLAYT TLVDHGLMTP GFAANKLGIP VPEDEEYADS YRVPLNMGTI GANEDIPLSL QTPEPEKKVR KRTQKKEA
|
| |