| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_4353 |
|---|
| Symbol | |
|---|
| ID | 8553735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 4662585 |
|---|
| End bp | 4663811 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase sigma factor, sigma-70 family |
|---|
| Protein accession | YP_003275388 |
|---|
| Protein GI | 262204180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00850687 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA CCGAGCAGGC GCGGGAGTCG GCCGAGGCCA CGGCCCGCGC CTGCTATGGG
CGGCTGCTGG CGATGCTGGT CGCCGAGAAC CACGATGTCG CCGCCGCCGA AGACGCACTC
GCCGACGCCT TCGAACGCGC GCTACGGACC TGGCCGGTCG AGGGAATTCC GCAACGCCCC
GAGGCATGGC TACTCACCGT GGCACGCAAT CGTCGTCGCG ACCTGTGGCG CTCCGCCGCC
TGGCGGACGT CGGTCCCACT CGACCCACGG CTCGACGATC GGGCCGCCCA ACCCGCCGAC
ACCAGGGACC GTCGCCTCGA ACTGCTCCTC GTCTGCGCAC ACGAGGCGAT CCCGCCGGCG
ATGCGAACGC CGTTGATGCT GAACACGATC CTCGGCTACA CCGCCGCGCA GATCGGGCTC
GCCTTCGCCG TACCGCCGAC CACGATGGCG TCGAGACTCG TGCGCGCCAA GAAGCAGATC
AGGCGGGACC GCATTCCCTT CACCGTCCCC GATGATCACG AACTGCCCGA CAGACTCGCC
CCGGTACTCG AAGCCATCTA CGGCGCCTTC AGCATCGAGT GGCCGAATCT GTCGCGCGCC
CGCCAGGCGC TCATCCTCGG GCTCGGCGAG GTCGTCGCCG ACGTGGCGCC CGCAAGCGCC
GAGGCGCACG GACTCGCCGC GTTCATGTGC CTGTCGAGCG CTCGCCTGGC CGCTCGGGCA
GACGTCGACG GCCGGTATGT CCCACTGCCG CAACAAGACC CGACTTCCTG GGACACCGCA
CTGATCGCCC GCGGCCATTC CCATCTGCGT GCCGCGCACC GGATCGGCGA GGTCGGCCGC
TTCCAGCTCG AAGCCGCCAT CGCCGCCGTG CACTGCGCAC GAACACCCGG CGGTGAGACC
AATTGGCCGG CGCTCCGCCG ACTACACGTC TCCCTGCAAC GTCTGGCGCC GACCGTCGGC
GGAGCCGTCG CCCTGGCGGC TGTCGTCGCG GAGACCGACG GGCCGGCGGC GGGCCTCGAT
CTCCTGAACC AGCTCGACGG TGCAGACCGG TATCAACCCG CATGGAGCAC GCGCGCCAAT
CTGCTCGACC GTGTCGGTCG CGCAGACGAC GCGGTCACCG CCTACGAACG GGCCATTGCA
CTGTCGACGG ATCAGTCCGA CCGCGACCAC TTGACCAAAC GTCGAGACGA ACTCGCCGCA
GCACAAGCGG CTCAATCGGA CAGATGA
|
|---|
| Protein sequence | MADTEQARES AEATARACYG RLLAMLVAEN HDVAAAEDAL ADAFERALRT WPVEGIPQRP
EAWLLTVARN RRRDLWRSAA WRTSVPLDPR LDDRAAQPAD TRDRRLELLL VCAHEAIPPA
MRTPLMLNTI LGYTAAQIGL AFAVPPTTMA SRLVRAKKQI RRDRIPFTVP DDHELPDRLA
PVLEAIYGAF SIEWPNLSRA RQALILGLGE VVADVAPASA EAHGLAAFMC LSSARLAARA
DVDGRYVPLP QQDPTSWDTA LIARGHSHLR AAHRIGEVGR FQLEAAIAAV HCARTPGGET
NWPALRRLHV SLQRLAPTVG GAVALAAVVA ETDGPAAGLD LLNQLDGADR YQPAWSTRAN
LLDRVGRADD AVTAYERAIA LSTDQSDRDH LTKRRDELAA AQAAQSDR
|
|---|
| |