| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_4160 |
|---|
| Symbol | |
|---|
| ID | 8553541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 4458424 |
|---|
| End bp | 4461312 |
|---|
| Gene Length | 2889 bp |
|---|
| Protein Length | 962 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding domain protein |
|---|
| Protein accession | YP_003275212 |
|---|
| Protein GI | 262204004 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.312376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTCA CGACCGACCG GTCGGCAGGT CCCCCGTCCG CCGAGGAAGC CACCGCCCAT
CAGGTGGCGC TCACCTTCGA GGACGGCGTC ACGCGATTCA TCACCTGCCG CGACGACCAG
ACCGTAGCCG ACGCCTCCTA CCGACAGCGC ATCAACATTC CGCTCGACTG CCGCGACGGT
GCATGCGGAA CCTGCAAGGC GTTCTGCGAA TCCGGCGACT ACGACGGCGG AACCTACATC
GAGGACGCGT TGACCGACGC CGAATCCGCC GAAGGTTATG CGTTGCCGTG CTGTATGAAA
CCGAAGTCCG ATCTCGTCCT GCAGATCGCC GCGACCTCGG ACATCGCCAA GACACAGGCG
GCCACGTTCA CCGGGAAACT CGTTGATCTC GAGCGTCTCT CGGAGTCGAC GGTGCGGATC
TCGGTGGACA TCGAGAACCG CGGCGCCCTG GCGTTCCTGC CCGGCCAGTA CGTCAACTTC
GCCGTACCCG GAACCGACGA CGGTGCCGGC AAGCCGATCA CCCGCTCGTA CTCGTTCGCC
AACGGACCGC ACGAGTCGCG ACTGCAGTTC CTGGTGAAGC TCACTCCCGG CGGCGTCATG
TCGACATATC TCACGGAGCG CGCCACGGTC GGCGAGGCGG TCAGCTTCAC GGGCCCGCAC
GGATCGTTCT TCCTGCGTGA ATCCTCGCGT CCCGTTTTGC TTCTCGCGGG CGGAACCGGG
CTGGCACCGA TCCTGTCGAT GCTGCGCAAG TTGCACGACG ATGACAGTCC TCGCAAGGCG
CACCTGATCT ACGGGGTGTC CACCGACACC GACCTGGTGG CACTCGACGA CATCGAGTAC
TTCGCTCGCG AACTCCCCGG CCTCACCTGG GATCACTGTG TCTCCGACCC GAACTCGTCG
GCGACCAACA AGGGCTACGT GATGAGCCTG ATCCGCGATC AGCACCTCTA TGACGGTGAC
GTCGCCGTGT ACCTGTGCGG TCCGCCGCCC ATGGTCGAAT CCGTCCGCAG CCACATCAGC
GAGGCCGGCA TCGAACCGAC CGGCTTCTAC TACGAGAAGT TCGCCCTCGC CGGGGCCGCG
GCGGCCAAGA CGACTACCTC CTCACCGGCG GCCGAGGCCA CCGACGCACC GATGTCGACC
GCGGCCGGCA ACCCCGAACC CGCTGTCGCC GAATCTGTTG TCCCCGAATC TGTTGTCCCC
GAATCTGTTG TCCCCGGATC TGTTGTCACC GAGTCGGCCA CCACCGTCGA CGTCGACACC
GACGAGCTCA TCACCGCCCC GGACGCCCGC GCGATCGCCG GCCAGGTGAC CTTGCCGTCG
GCCGAGATCG ACCCGTTGGG CCTGTCCGTC GGCACCGGCC CCGACAGCGA TTCGCTGCTC
CGCATCGCTG GTCAGCAGGT CTGGTCGGAC ATCACCGGCG ACGGGGATCC ACTCGACTCC
GATACCGGTG CGCTGCTGCC ACATCCGGCC CGCGCGATCG CCGGCCAGGA GGTCTTCACC
GCTGCCGAGG TGCAACCGCT CGTCGCCCCG GCTCCTCTGC CGACGGAAAC TGTTGTGCCG
CAATCCGTGC AGGCGCCCAC TCCGGCCGTC GCGGCCGGCG CGCCGACCGT CGGCTCGCAG
GGCTACGAGA TCGGTGAGGA ACATCCGGGT GTGCACGAGT CCGACGCGCT GTTCGAGGCA
CGGGCCGCGC TGGAACTCGG TGCGCTCGAA CTGACCTTCG GCCGGCTCAG CACCGGTCAG
CTCACCGGTT ACCGACTGCT CGCCGAAGCG ACCCTGCCCT ACGTCGAGGA TGACCACTTC
GTGGACGCCG CCGAGTACAC CGAGACCAAC GCCAACTTCC ACGACTATCT GTTCACGCTC
ACCGGCAACA GCCATCTACT CGAGGCGTAT TCGGCGCTCG GCGTCAAGGG CCGCATGGGG
GAGGTCCTGC GCAACGCCAC CTGGTGTCAC CCGCTGTGTG CACGCGATCA CGTCGACATC
GTCGACGCCT TCGAGTCGGG TGACCGGGAC AAGGCGCGTG CTCTGATCAG TGCCCATGCC
GACCGCTCCA AGCAGACCAT GCGTCGGGCG ATGGCCGACG AGATGGCCTC ACGCAGACCA
CGTTTCGTCA CTCCCGGTCG GTTCTCCGGC AAGGTCGTGG TGGTGACGGG GGCCGCTCAG
GGCATCGGCG CCCAGACCGC ACGCCGCATC GCGGCCGAGG GCGGCACCAT GGTGCTCGCC
GACCGGTCCG ACCTCGTCAA CGAGCTCACC GACGAATTGC GGGCGGATTC ATCGGCTCTC
GCGGTCGTCT CCGACCTCGA ACGCTACGAC GGCGCGACGG CGATCGTCGA GAAGGCGCTC
GCCACCTTCG GCCGGGTGGA CGTGCTGATC AACAACGTGG GCGGTGCGAT CAACTTCAAG
CCGTTCACCG AGTTCACCGA CGACGAGATC CGCGCCGAGA TCGACCGGTC GCTGATGACC
ACCCTGCACA TGTGCCGGGC GGTCCTACCC GGCATGGTGC AGCGCGGTAG CGGCGTCATC
GTCAACGTGT CCTCGGCGGC CACCCGCGGT ATCCATCGGA TTCCGTACTC GGCCGCTAAG
GGTGGGATCA ACGCGATCAC CGCGTCACTG GCGGTGGAGT ACGCCGAGCA CGGCATCCGG
GTGGCGGCAA CCGCCCCCGG CGGCACCGAG GCACCACCGC GGCGGATCTC TCGTGGCACA
CCCGAGCCGC GCAACGAGAC CGAGTCGCAA TGGTTCCAGG CGCACATCGA CCAGACGCTC
GACTCGTCGC TGCTCAAACG GTACGGGACG CTGGACGAGC AGGCCGCCGC GATCTGCTTC
CTCGCCTCCG ACGAGGCGTC CTACATCACC GGGACGGTGC TCCCGGTGGC CGGCGGTGAC
CTCGGGTGA
|
|---|
| Protein sequence | MTVTTDRSAG PPSAEEATAH QVALTFEDGV TRFITCRDDQ TVADASYRQR INIPLDCRDG
ACGTCKAFCE SGDYDGGTYI EDALTDAESA EGYALPCCMK PKSDLVLQIA ATSDIAKTQA
ATFTGKLVDL ERLSESTVRI SVDIENRGAL AFLPGQYVNF AVPGTDDGAG KPITRSYSFA
NGPHESRLQF LVKLTPGGVM STYLTERATV GEAVSFTGPH GSFFLRESSR PVLLLAGGTG
LAPILSMLRK LHDDDSPRKA HLIYGVSTDT DLVALDDIEY FARELPGLTW DHCVSDPNSS
ATNKGYVMSL IRDQHLYDGD VAVYLCGPPP MVESVRSHIS EAGIEPTGFY YEKFALAGAA
AAKTTTSSPA AEATDAPMST AAGNPEPAVA ESVVPESVVP ESVVPGSVVT ESATTVDVDT
DELITAPDAR AIAGQVTLPS AEIDPLGLSV GTGPDSDSLL RIAGQQVWSD ITGDGDPLDS
DTGALLPHPA RAIAGQEVFT AAEVQPLVAP APLPTETVVP QSVQAPTPAV AAGAPTVGSQ
GYEIGEEHPG VHESDALFEA RAALELGALE LTFGRLSTGQ LTGYRLLAEA TLPYVEDDHF
VDAAEYTETN ANFHDYLFTL TGNSHLLEAY SALGVKGRMG EVLRNATWCH PLCARDHVDI
VDAFESGDRD KARALISAHA DRSKQTMRRA MADEMASRRP RFVTPGRFSG KVVVVTGAAQ
GIGAQTARRI AAEGGTMVLA DRSDLVNELT DELRADSSAL AVVSDLERYD GATAIVEKAL
ATFGRVDVLI NNVGGAINFK PFTEFTDDEI RAEIDRSLMT TLHMCRAVLP GMVQRGSGVI
VNVSSAATRG IHRIPYSAAK GGINAITASL AVEYAEHGIR VAATAPGGTE APPRRISRGT
PEPRNETESQ WFQAHIDQTL DSSLLKRYGT LDEQAAAICF LASDEASYIT GTVLPVAGGD
LG
|
|---|
| |