Gene Gbro_2260 details

Gene Information

• Locus tag: Gbro_2260
• ID: 8551619
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: +
• Start bp: 2399453
• End bp: 2401501
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 70%
• Product: deoxyxylulose-5-phosphate synthase
• Protein accession: YP_003273401
• Protein GI: 262202193

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.560033
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTGC TCGACCGGAT CAACTCGCCG GCCGATCTGG CCGCGTTGTC GCCCGCCGAA 
ATGGACGCAC TGGCGGTCGA GATCCGGGAC TTCCTCATCG CCAAGGTGTC GGCGACCGGC 
GGCCACCTCG GCCCCAACCT CGGCGTCGTC GAACTCACGC TGGCGCTGCA TCGCGTCTTC 
GACTCCCCGC ATGATCCGGT CATCTTCGAC ACCGGCCACC AGTGCTACGT CCACAAGATC 
CTGACCGGCC GCAAGGACGG CTTCGACGCG CTCCGGCAGA AGGATGGCCT CACCGGGTAT 
CAGGAACGTG CCGAGAGCCC GCACGACTGG GTGGAGTCCT CGCACGCCTC GGCCGCACTG 
TCCTACGCCG ACGGGCTGAC CAAGGCCTTC GCACTGACCG GACAGACCGA CCGCACAGTG 
GTCGCGGTCG TCGGTGACGG CGCGCTGACC GGGGGCATGT GCTGGGAGGC GATGAACAAC 
ATAGCCGCCG CGGAGCGACC ACTGGTGATC GTCGTCAACG ACAACGGCCG ATCCTATGCG 
CCGACCATCG GCGGATTGGC CAGCCATCTG TCCGGGCTGC GTCTGCAGCC GGGCTACGAG 
CGCTTTCTCG ACGAGAGTCG CAAGGTGGTC AAACAGCTTC CGGTGGTGGG TGATTCGGCC 
TACGCCGTGC TGCACGGGGT GAAGAGCGGA CTCAAGGATC TGCTCACGCC GCAGGCCATG 
TTCACCGACC TCGGACTCAA GTACGTCGGT CCGGTCGACG GTCATGACGT CGCCGCCGTC 
GAATCCGCGC TGCGTCAGGC CCGCGACTTC GGCGGTCCGG TGATCGTGCA CGTCGTGACC 
CGCAAGGGCA TGGGGTACGC ACCGGCGGAG AACCACGAGG CCGATCAGAT GCACGCCACC 
GGCATCATCG ACCCGCTCAC CGGTCGCGCG ACGAGCGTCG CCCCGCAGGA CTGGACCTCG 
GTGTTCTCCG CCGCACTGCT CGACGCGGGG GCGGCCCGCG ACGACGTGGT GGCCATCACC 
GCGGCGATGC CCGGACCCAC CGGGCTCACC CCGTTCGGGG AGCGGTACCC GGACCGGATG 
TTCGACGTCG GCATCGCCGA ACAACACGCG ATGACCTCGG CTGCCGGACT AGCGCTCGGT 
GGTCTGCACC CGGTCCTCGC GATCTACTCC ACCTTCCTCA ACCGTGCCTT CGACCAGCTG 
CTCATGGACG TCGCCCTGCT GCGGCTCCCG GTCACCCTGG TGCTCGACCG GTCCGGGGTC 
ACCGGTCCCG ACGGGCCCAG CCACCACGGC ATGTGGGACC TCTCGCTGAT GGCGATGGTC 
CCGGGCCTGC GGGTGGCGGC GCCGCGCGAC GCCGTCCGGC TGCGGGAGGA ATTCGACGAG 
GCGCTCGGCA CCGACGACGG CCCCACCGCC CTGCGTTTCT CCAAAGGCGC TGTCCCCGAA 
GACATCCGCG CGATCGAGCG ACTGGCCGAC GGTGTCGACG TGCTCCACCG GGCCGACGGT 
GCCCGGCTGG GCCCGGCCGC CGCAGATGTG CTGATCGTCG CCGTTGGCGC CTTCTGCGGA 
CTCGCCGTGG ACGCTGCGGC GCGGCTGGCC CGGCAGGGTA TCGACGCGAC CGTCGTCGAC 
CCGCGGTGGG TGCTGCCGGT ACCGGAATCG ATCGTCGACG CCGCGCGTCG GCACCGGCTG 
GTGGTCACCC TCGAGGACGG CGGGGTCAGT GGTGGTGTGG GATCGGCGGT GGCCGCCGCG 
ATCTCGGCGG CCGAAATCTC GGTGCCCGTT CAGATACGCG GTGTGCCACA GCAATTCGTC 
CCGCACGCCT CGCGCGGCGA GATCCTTGCC GAGCTGGGTC TCACCGCCCA GGACCTGGCC 
CGCACGATCA CCGCGACGGT CGCCGGTATG CACAGCACAC CGGGGCTCGA GGGCCAGCTG 
TCCGACGAGG TCCGCGGCGT CGCGGGCGAT GCCCCGGTCA ACGGCACCGG CGTCGAGGAT 
GGCGGCTCAC GTGCCGGCGC GCCGACCGAG CGGCAGGCCG CCGACACCCG CGCCGACGAC 
CAGCACTGA 

 

Protein sequence

MSVLDRINSP ADLAALSPAE MDALAVEIRD FLIAKVSATG GHLGPNLGVV ELTLALHRVF 
DSPHDPVIFD TGHQCYVHKI LTGRKDGFDA LRQKDGLTGY QERAESPHDW VESSHASAAL 
SYADGLTKAF ALTGQTDRTV VAVVGDGALT GGMCWEAMNN IAAAERPLVI VVNDNGRSYA 
PTIGGLASHL SGLRLQPGYE RFLDESRKVV KQLPVVGDSA YAVLHGVKSG LKDLLTPQAM 
FTDLGLKYVG PVDGHDVAAV ESALRQARDF GGPVIVHVVT RKGMGYAPAE NHEADQMHAT 
GIIDPLTGRA TSVAPQDWTS VFSAALLDAG AARDDVVAIT AAMPGPTGLT PFGERYPDRM 
FDVGIAEQHA MTSAAGLALG GLHPVLAIYS TFLNRAFDQL LMDVALLRLP VTLVLDRSGV 
TGPDGPSHHG MWDLSLMAMV PGLRVAAPRD AVRLREEFDE ALGTDDGPTA LRFSKGAVPE 
DIRAIERLAD GVDVLHRADG ARLGPAAADV LIVAVGAFCG LAVDAAARLA RQGIDATVVD 
PRWVLPVPES IVDAARRHRL VVTLEDGGVS GGVGSAVAAA ISAAEISVPV QIRGVPQQFV 
PHASRGEILA ELGLTAQDLA RTITATVAGM HSTPGLEGQL SDEVRGVAGD APVNGTGVED 
GGSRAGAPTE RQAADTRADD QH