| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1139 |
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| Symbol | |
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| ID | 8550479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gordonia bronchialis DSM 43247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013441 |
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| Strand | + |
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| Start bp | 1200812 |
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| End bp | 1204768 |
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| Gene Length | 3957 bp |
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| Protein Length | 1318 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_003272340 |
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| Protein GI | 262201132 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTCGACG TCAACTTTTT CGACGAACTG AAAATCGGCC TCGCCACGGC CGACGACATC
CACAACTGGT CATACGGTGA GGTCAAGAAG CCCGAGACCA TCAACTACCG CACGCTCAAG
CCCGAGAAGG ACGGCCTGTT CTGCGAGAAG ATCTTCGGAC CGACTCGCGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTGCGCTTC AAGGGCATCA TCTGCGAACG CTGCGGCGTG
GAGGTGACCA AGGCCAAGGT GCGCCGTGAG CGCATGGGTC ACATCGAGCT GGCCGCACCG
GTCACCCACA TCTGGTACTT CAAGGGTGTG CCGAGCCGGT TGGGCTACCT GCTCGACCTG
GCGCCGAAGG ATCTCGAGAA GATCATCTAC TTCGCCGCCT ACGTGATCAC CGCGGTCGAC
GACGAGCTCC GGCACAACGA GCTCTCCACT CTCGAGGCCG AGATGGAGGT CGAGAAGAAG
GCCGTCGCCG ATCAGCGCGA CGTCGATCTC AACGAGCGTC AGCAGAAGCT CGAGCAGGAT
CTCGCCGAGC TCGAGGCCGA GGGTGCCAAG GCCGACGTCC GCCGCAAGGT CAAGGACGGC
GCCGAGCGCG AGATGCGCCG GATGCGCGAC TCCGCCCAGC GTGAGCTGGA CGCGCTCGAC
GAGCTGTGGG ACAAGTTCAC CAAGCTCGCC CCGCGCGACC TGATCATCGA CGAGAAGCTG
TATCACCAGC TCGTCGAGCG GTACGGGGAG TACTTCACCG GGTCGATGGG TGCCGAGGCC
ATCAAGAAGC TCCTCGAGAC CTTCGACATC GATGCCGAGG CCGATTCGCT GCGCGACACC
ATCCGCAACG GCAAGGGCCA GAAGAAGCTG CGTGCGCTCA AGCGACTCAA GGTCGTGGCC
GCGTTCCAGC AGTCCGGCAA TTCGCCGCTG GGCATGGTGC TCGACGCCGT GCCGGTGATT
CCGCCGGAGC TTCGTCCGAT GGTGCAGCTC GACGGTGGCC GCTTCGCGAC CTCCGACCTC
AACGACTTGT ACCGCCGCGT CATCAACCGC AACAACCGCC TCAAGCGACT GATCGATCTC
GGTGCTCCCG AGATCATCGT GAACAACGAG AAGCGGATGC TGCAGGAGTC GGTGGATGCC
CTGTTCGACA ACGGTCGTCG CGGCCGTCCG GTCACCGGAC CGGGTAACCG CCCGCTGAAG
TCGCTGAGCG ATCTGCTCAA GGGCAAGCAG GGTCGTTTCC GTCAGAACCT GCTCGGCAAG
CGCGTCGACT ACTCGGGCCG TTCGGTCATC GTCGTCGGCC CGCAGCTCAA GCTGCACCAG
TGCGGTCTGC CGAAGCTGAT GGCGCTCGAG CTGTTCAAGC CGTTCGTGAT GAAGCGTCTC
GTCGATCTCA ACCAGGCGCA GAACATCAAG TCCGCCAAGC GGATGGTGGA GCGTCAGCGT
CCGGCCGTGT GGGACGTCCT CGAAGAGGTC ATCGCCGAGC ACCCGGTGCT GCTGAACCGT
GCTCCTACCC TGCACCGTCT GGGCATCCAG GCCTTCGAAC CGCAGCTGGT GGAGGGCAAG
GCCATTCAGC TGCACCCGCT GGTGTGTGAG GCGTTCAACG CCGACTTCGA CGGTGACCAG
ATGGCCGTGC ACCTCCCGCT GAGTGCGGAG GCGCAGGCCG AGGCGCGCAT CCTGATGCTG
TCGAGCAACA ACATCCTGTC GCCGGCGTCG GGCCGTCCGC TGGCCATGCC GCGTCTGGAC
ATGGTGACCG GCCTGTACTA CCTGACCACC CTCACCGAGG GTGCCGTCGG CGAGTACACC
CCGGCCACCG CCGACGACGT CGAGCGCGGT GTGTACTCGA GCCCGGCCGA GGCCATCATG
GCCGTCGATC GTGGTGCGCT CACCGTGCAG TCGCGCATCA AGGTGCGGCT GACCGATCAG
CGTCCGCCGG CCGAGATCGA GGCCGAGCTC TTCCCGGAAG GCTGGTCCTT CGGGCAGCCG
TGGGACGCCG ACACCACGCT GGGTCGCGTG CTCTTCAACG AGCTGCTGCC GGTGGAGTAC
CCGTACGTCA ACGAGCAGAT GCCGAAGAAG CGTCAGGCCG TGATCATCAA CGATCTGGCC
GAGCGGTACC CGATGATCGT GGTGGCGCAG ACCGTCGACA AGCTCAAGGA CGTCGGTTTC
TACTGGGCGA CCCGCTCGGG TGTGACCGTC TCGATGGCCG ACGTGCTGGT GCCGCCGCAG
AAGGCGGAGA TCCTCGACAA GTACGAGGAG CGGGCCGACG GCCTGGAGCG CAAGTTCCAG
CGTGGTGCCC TCACCCCGGA CGAGCGTCGC GACGCTCTGG TGGAGATCTG GAAGCAGGCC
ACCGAAGAGG TGGGCGCGGC CATGGAGGCG CACTACCCGG ATGACAACCC GATCCCGATG
ATCGTGAAGT CGGGTGCGGC GGGCAACATG ACCCAGATCC GCTCGCTGGC GGGCATGAAG
GGTCTGGTGA CCAACCCGAA GGGTGAGTTC ATCCCGCGTC CCATCAAGTC CTCGTTCCGC
GAGGGCCTGA CCGTGGCGGA GTACTTCATC AACACGCACG GCGCCCGCAA GGGTCTGGCC
GACACCGCGC TGCGTACCGC CGACTCGGGT TACCTGACCC GTCGTCTGGT GGACGTCAGC
CAGGACGTCA TCGTGCGTGA GGTGGATTGC GGCACCGAGC GTGGCATCAC CACGACCATC
GCCGAGCGCC AGCCGGACGG CACGCTCATC CGCGATGCGC ATGTGGAGAC CTCCACCTAC
GCGCGGACCC TGGCGACCGA CGCCCTCGAC GCCGACGGCA ACGTCATCGT CGAGCGCGGT
CACGATCTCG GCGACCCCGC GATAGAGGCG CTGCTGGCCG CCGGCATCAC CCAGGTCAAG
GTCCGCTCGG TGCTCACCTG TGCCACCGGC ACCGGTGTGT GCGCGCATTG CTACGGCCGT
TCGATGGCCA CCGGCAAGCT CGTCGACATC GGCGAGGCCG TCGGTATCAT CGCGGCCCAG
TCGATCGGTG AGCCCGGTAC CCAGCTGACG ATGCGTACGT TCCACCAGGG TGGCGTCGGT
GACGACATCA CCGGTGGTCT GCCGCGTGTC CAGGAGCTCT TCGAGGCTCG CGTGCCCAAG
GGTGTCGCGC CGATCGCGGA GGTCTCCGGC CGGGTGCGCC TGGAGGACGA CGACCGCTTC
TACAAGATCA CCATCGTCCC CGACGACGGT TCCGAAGAAG TGGTCATCGA CAAGATCTCC
AAGCGTCAGC GTCTGCGTGT CTTCAAGCAC GACGACGGCT CGGAGCGTCT GCTCTCCGAC
GGCGACCACG TGGAGGTCGG TCAGCAGCTC ATGGAGGGCT CGGCCAACCC GCACGAGGTG
CTGCGCGTGA TGGGTCCCCG TCAGGTGCAG GTCCACCTGG TCAACGAGGT CCAGGAGGTC
TACCGCAGCC AGGGTGTGTC GATCCACGAC AAGCACATCG AGACCATCGT GCGGCAGATG
CTGCGTCGCG TGACGATCAT CGATCACGGT TCGACGGAGT TCCTGCCCGG TTCGCTGGTC
GAGCGTGCCG AGTTCGAGGC GGCCAACCGT CAGGTCGTCG CCGAGGGCGG CGAGCCGGCA
GCCGGACGTC CGGTGCTGAT GGGTATCACC AAGGCATCGC TGGCGACCGA GTCGTGGCTG
AGTGCGGCGT CGTTCCAGGA GACCACGCGT GTCCTGACCG ACGCGGCCAT CAACAGCCGC
AGCGACAAGC TGATCGGTCT GAAGGAGAAC GTGATCATCG GTAAGTTGAT CCCGGCCGGT
ACCGGCATCA ACCGGTACCG CAACATCCAG GTCCAGCCGA CCGAGGAGGC GCGTGCCGCG
GCGTACGCGG TGCCGTCCTA CGACGACACC TACTACAGCC CGGACGGCAC CTTCGGTGCT
CCGGCAGGGG CTGCGGTGCC GCTGGACGAC TACGGTTTCT CCAACGACTA CCGGTAG
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| Protein sequence | MLDVNFFDEL KIGLATADDI HNWSYGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTKAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKIIY FAAYVITAVD DELRHNELST LEAEMEVEKK AVADQRDVDL NERQQKLEQD
LAELEAEGAK ADVRRKVKDG AEREMRRMRD SAQRELDALD ELWDKFTKLA PRDLIIDEKL
YHQLVERYGE YFTGSMGAEA IKKLLETFDI DAEADSLRDT IRNGKGQKKL RALKRLKVVA
AFQQSGNSPL GMVLDAVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL
GAPEIIVNNE KRMLQESVDA LFDNGRRGRP VTGPGNRPLK SLSDLLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKLMALE LFKPFVMKRL VDLNQAQNIK SAKRMVERQR
PAVWDVLEEV IAEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCE AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILSPAS GRPLAMPRLD MVTGLYYLTT LTEGAVGEYT
PATADDVERG VYSSPAEAIM AVDRGALTVQ SRIKVRLTDQ RPPAEIEAEL FPEGWSFGQP
WDADTTLGRV LFNELLPVEY PYVNEQMPKK RQAVIINDLA ERYPMIVVAQ TVDKLKDVGF
YWATRSGVTV SMADVLVPPQ KAEILDKYEE RADGLERKFQ RGALTPDERR DALVEIWKQA
TEEVGAAMEA HYPDDNPIPM IVKSGAAGNM TQIRSLAGMK GLVTNPKGEF IPRPIKSSFR
EGLTVAEYFI NTHGARKGLA DTALRTADSG YLTRRLVDVS QDVIVREVDC GTERGITTTI
AERQPDGTLI RDAHVETSTY ARTLATDALD ADGNVIVERG HDLGDPAIEA LLAAGITQVK
VRSVLTCATG TGVCAHCYGR SMATGKLVDI GEAVGIIAAQ SIGEPGTQLT MRTFHQGGVG
DDITGGLPRV QELFEARVPK GVAPIAEVSG RVRLEDDDRF YKITIVPDDG SEEVVIDKIS
KRQRLRVFKH DDGSERLLSD GDHVEVGQQL MEGSANPHEV LRVMGPRQVQ VHLVNEVQEV
YRSQGVSIHD KHIETIVRQM LRRVTIIDHG STEFLPGSLV ERAEFEAANR QVVAEGGEPA
AGRPVLMGIT KASLATESWL SAASFQETTR VLTDAAINSR SDKLIGLKEN VIIGKLIPAG
TGINRYRNIQ VQPTEEARAA AYAVPSYDDT YYSPDGTFGA PAGAAVPLDD YGFSNDYR
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