| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_0275 |
|---|
| Symbol | |
|---|
| ID | 8549602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 310442 |
|---|
| End bp | 312037 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_003271512 |
|---|
| Protein GI | 262200304 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0658046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAC TCATGGAGCG GCTCGACACG TCTGCGCCGC GGCGACCAGG CGTCGTCCTC
GTGGTGCTCT CGCTCGCAGC ATTCATGGCC AGCCTCGACG TGTTCATCGT CAACGTCGCC
TTCGATCAGA TCGGGCGCGA CTTTCACGGT GTGGGTCTGC CCGAGCTGTC CTGGGTTCTC
AACGCGTACA CCATCGTCTA CGCCGCACTA CTGGTGCCGG CCGGACGGAT CGCCGACCGC
TACGGCCGCA AGGGGGCGTT CCTGGCGGGC CTGGCACTCT TCACCGTCGC CAGCGCGGCT
TGTGCTCTGG CGCAGGGCAT CTGGTGGTTG GTGGCGTTCC GGGTGATACA AGCCGTCGGG
GCGGCGATCC TCACGCCGGC CAGCCTGGGA CTCGTCGTGT CGACGATGCC GGTGGCCGTG
CGCGCGCGGT CGGTGCGCAT CTGGGCGGCC ACCGGGGCGC TGGCCGCCGC CCTCGGGCCT
GCGGTCGGTG GCCTGCTCGT GGAGGCGTCG TGGCGGTGGG TCTTTCTCGT CAACGTGCCG
GTCGGCATCG CGGCGCTGAT CGCCGGTGCC CTGGTCCTGA CCACATCGGC AGATGAATCG
GGCACGCCGC TACCCGATCT GCTCGGTGCC GGACTCCTGG CGGTGGCCAT CGGCGCACTC
ACCCTTGGTC TCGTCGAAGG TCCCGATTGG GGGTGGTCCG ACGGCCGGGT CGTCGGGGCG
TGGATCCTCG CGGTGGTCGC CTTCGCCGGC TTCGTCGTCA GTTCCGGGCG GCACCGGGTC
CCGGTGATCG ACCCCGCGCT GCATCGCGTG CGATCCTTCG CCTTCGCCAA CGTGACCGCG
GTGCTGTTCG GTGTCCCCTT CGCCGGTGCG CTGCTCGCGA ATATCCTCTG GCTCCAGCAG
GTGTGGGGGT ACTCCGCGAT CAAGACCGGC TTCGCCGTCT CGGTCGGGCC GCTGATGGTT
CCGATCTTCG CTGCGGTAGC CCATCGGCTC AGTGCGCGAA TTCCGGTGGG CGCCATCGTC
GCTGGCGGTT GTGCGCTCTT CGGCCTCGGC GGCGTGCTGA TCGCAGCATC GGTCGGTGCC
GAGCCCGACT ACGCCGCCGA GATCCTGCCC GGGTGGCTCA TCGGTGGTGT GGGCGTCGGG
CTGGCTCTGC CGTCGATCCT GTCGGCGGCG ACTGCCGACC TGCCGGCTCA TCAGTCTGCG
ACCGGCAGTG CGATTGTCAA CATGAGTCGG CAGGTCGGCC TGGTCCTCGG TGTCAGTGTG
CTCGTCGCCA TCCTGGGTAC GCCGGTCGGT TTCGAGAACG CGCACAGCGC TTTTCAGCAC
GCATGGTGGG TGCTGGGGGC AGTGGCCGCC GCGGCCGCGG TGGCCGCACT CGGGATGACG
CCACCGTCAC GGGAATCGGG TGTGGGGTAC CCGCCCGCTA CTGCGGCCGC GAGAACCGCT
CCCGACGCCC CAGTCCGCGC AGCTGCATCC ACTCCCGAAA ACCTTTCGGG TCACGTTGCT
GCACAAGGAA ATACCACCCG AATCGGGCAT ACTCCTGGGG CAGCAGCCTC CGCAGACCGG
GCTGACTCAT CAGATATCCG CGGTTGCGGT AGGTGA
|
|---|
| Protein sequence | MTKLMERLDT SAPRRPGVVL VVLSLAAFMA SLDVFIVNVA FDQIGRDFHG VGLPELSWVL
NAYTIVYAAL LVPAGRIADR YGRKGAFLAG LALFTVASAA CALAQGIWWL VAFRVIQAVG
AAILTPASLG LVVSTMPVAV RARSVRIWAA TGALAAALGP AVGGLLVEAS WRWVFLVNVP
VGIAALIAGA LVLTTSADES GTPLPDLLGA GLLAVAIGAL TLGLVEGPDW GWSDGRVVGA
WILAVVAFAG FVVSSGRHRV PVIDPALHRV RSFAFANVTA VLFGVPFAGA LLANILWLQQ
VWGYSAIKTG FAVSVGPLMV PIFAAVAHRL SARIPVGAIV AGGCALFGLG GVLIAASVGA
EPDYAAEILP GWLIGGVGVG LALPSILSAA TADLPAHQSA TGSAIVNMSR QVGLVLGVSV
LVAILGTPVG FENAHSAFQH AWWVLGAVAA AAAVAALGMT PPSRESGVGY PPATAAARTA
PDAPVRAAAS TPENLSGHVA AQGNTTRIGH TPGAAASADR ADSSDIRGCG R
|
|---|
| |