Gene Gbro_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbro_0196 
Symbol 
ID8549523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGordonia bronchialis DSM 43247 
KingdomBacteria 
Replicon accessionNC_013441 
Strand
Start bp208333 
End bp209841 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content70% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_003271436 
Protein GI262200228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCTATT CCCGGCCCAG ACTCTCGATC GCACCGGCGA TCATCGCGAT CGCCGCGCTG 
GCAGGCGCCG TTGCGGTGAG CGTGACCGAT CGCGACCCGA GGCTCGTGGA CCGGAGCAAG
GAGATCGGCG CCACGGGGAT CGAACAGGTG TCGCTGCGCG AGTTGCCCAC CGCGGTGCTC
GACGTCGCCA CCTCCGGCCT CGATGCGGTC GGGATCAAGC TCCCGGCGAT CGATCCCACC
CATTTCCCGC TTCCCGATAT CACCGTGCCG GTGCCGTCGG GCGTGTTGCC GTCACCGACG
CGATCCGCGC CCACAACCCC ACGTTCGACG CCGAGCGCAT CAGCGACCTC GCCATCGACG
ACGCGATCCA CGCCGCGAAC ACCACGGTCG ACCACCAGAC GCACAGCGCC GACGACACCT
CCCACGCCAC GCATGGCCGA CGGCCGGCCG GTGGGTGCCG CCGTCACGAC CCTCGTGCGC
GACGCCCCGA TCAAGATGCT CGCCTTCACC TGGGACCGCC CGGTCGACGT GGACATGATG
GTGCGCGCCA AGCGATCCGA CGGCCGATGG GCACCGTGGA CGGCCCTCGA GCCGGCGACC
GATTCCGCCG CGGCCACCCC CGGGCGGCCT GCCGGCACCG AACCCATCTG GGTCGGCGAT
GCCCGGGAGG TGCAGATCGC CGCCACCGAC GACGGTCTGG CCATCCCGGC GGCCGAAGCC
CAGGACAGCG GGCTTCCGCA GCTCGCGGTC GGTACTGCCA GCGAGATCAT CGGCACACTG
GTGACCACCG CGCTCTCGGC CGTCAAGGCA ACCCTGATCA GCCCGGAATC GATTCTGTCG
CTTGGCTCGT CGCTGCTGAC CCCGTTGCTC GGCGGCCCAC AGGTGGTGGC CCGGGCCCAG
TGGGGCGCCG ACGAGGCGAT CCGCTGTTCA CAACCCGCCT ACTCACCGGC GCTGCGCGGC
GCCATCATTC ATCACACCGC GGGCAGCAAC GAGTACACCG CGGCCCAGTC GGTGGAGATC
GTGCGCGGGA TCTACGCGTA CCACGCACGG ACACTGAACT GGTGCGACAT CGGCTACAAC
GTCCTCGTCG ACAAGTACGG ACAGATCTTC GAGGGTGCCT TCGGCGGACT GGACCGCAAC
GTGGAGGGCA CCCACACCGG AGGTTTCAAC CGGTCGACGG TGGGGGTGTC GATGATCGGC
AACCTCGACG TCGCGGCGCC CACCGGTGCG ATGGTCGCCT CGGTCGCCCG GTTCCTGCGG
TGGCGCCTCG GCAAGGCCGG GCTCAACCCG GGCGGCACGG CCACCCTCAC CGCGGAAGCG
TTCTCCGACA GCAAGTTCCC CGCCGGCGCT CAGACCACCC TGCCGATGAT CGCCGGGCAT
CGGGATTACA ACAACACCAG TTGTCCGGGA GTTCAAGGCT ATCCGGCGTT GGCACAGATC
CGGGCGCTGG CGGGCGGAGC CCCCGCACCG ACGCCCTCTC CCACCCCGAC CCCGAACGCG
CCCCAGTAG
 
Protein sequence
MRYSRPRLSI APAIIAIAAL AGAVAVSVTD RDPRLVDRSK EIGATGIEQV SLRELPTAVL 
DVATSGLDAV GIKLPAIDPT HFPLPDITVP VPSGVLPSPT RSAPTTPRST PSASATSPST
TRSTPRTPRS TTRRTAPTTP PTPRMADGRP VGAAVTTLVR DAPIKMLAFT WDRPVDVDMM
VRAKRSDGRW APWTALEPAT DSAAATPGRP AGTEPIWVGD AREVQIAATD DGLAIPAAEA
QDSGLPQLAV GTASEIIGTL VTTALSAVKA TLISPESILS LGSSLLTPLL GGPQVVARAQ
WGADEAIRCS QPAYSPALRG AIIHHTAGSN EYTAAQSVEI VRGIYAYHAR TLNWCDIGYN
VLVDKYGQIF EGAFGGLDRN VEGTHTGGFN RSTVGVSMIG NLDVAAPTGA MVASVARFLR
WRLGKAGLNP GGTATLTAEA FSDSKFPAGA QTTLPMIAGH RDYNNTSCPG VQGYPALAQI
RALAGGAPAP TPSPTPTPNA PQ