8 homologs were found in PanDaTox collection
for query gene Gbem_3989 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_3989  lipoprotein, putative  100 
 
 		 121 aa  222  2e-57  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_4082  lipoprotein, putative  88.43 
 
 		 114 aa  113  1.0000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008609  Ppro_0572  putative lipoprotein  52.89 
 
 		 100 aa  86.3  1e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  0.520786  n/a   
 
 
-
 
NC_007517  Gmet_3486  putative lipoprotein  53.27 
 
 		 100 aa  68.6  0.00000000003  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_2160  hypothetical protein  49.59 
 
 		 92 aa  63.5  0.0000000008  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0182  putative lipoprotein  47.93 
 
 		 100 aa  54.3  0.0000005  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_2436  lipoprotein, putative  35.9 
 
 		 101 aa  40.8  0.006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.00000000243006  decreased coverage  0.000000000509211 
 
 
-
 
NC_011761  AFE_2811  lipoprotein, putative  35.9 
 
 		 101 aa  40.8  0.006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.000106575  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>