| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3789 |
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| Symbol | |
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| ID | 6780653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4328397 |
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| End bp | 4329839 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769784 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_002140577 |
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| Protein GI | 197120150 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATGA AGAAACAGGA AGCGTATTTG AAGGAGTGGC AGGGGCACGA GGAGCTTGCA
GAGCAGATGC TCCCCATCAT CGGTCGCCTG TACCGTGACC ACAACATCGT GACCACCGTG
TACGGCAAGT CGTTGGTCAA CATCCCGACC ATCGACATCC TCAAGGCGCA CCGGTTCGCC
CGCCTGATCC TCGACGGCGA GCTGACCGTG CAGGAGACAT TTCCCATTCT CGAAGCCATC
GGCAAGATGG ACCTCGCTCC GGCCCGCATC GACCTGGGAA GGCTGGCGGT CCGCTACCAG
TCGCAGCAGG GAGGCTCGGT CGCCGACTTC CTGAGCCGCG AACTTGCCTC CGTCAATACC
GGCCGCACGC CGCTTTTGGA CGAGCCGCAG GACATCGTGC TGTACGGCTT CGGCCGCATC
GGTCGCCTCG TGGCCCGCAT CCTGGTCGAG AAGTCCGGCT CCGGCGAGAA GCTCAGGCTG
CGCGCGGCCG TGGTCCGCAA GGGCGGCCCG GACGACCTGG TGAAAAGGGC GAGCCTTCTG
CGTCGCGACT CGGTGCACGG ACCCTTCAAC GGGATCATCA CCATCGACGA GGAAGAAAAC
GCGATCATCG CCAACGGCAA CATGATCCGC ATCATCTACG CCGACGCGCC GGAGAACGTA
GACTACGCAC AGTACGGCAT CCATAACGCG ATCGTGATCG ACAACACCGG CAAGTGGCGC
GACCGCGAAG GACTGGGGCG TCACCTGAAG GCGTCGGGCG TCTCCCAGGT CGTGCTCACT
GCACCGGGCA AAGGGGACAT CCCGAACGTC GTCTTCGGCG TCAACAATGA ACTGATCACC
TCCACCGAGA GCATCTTCTC CGCGGCAAGC TGCACCACCA ACGCCATCGT GCCGGTTTTG
AAGGCCGTGA GCGACAACTT CGGGATCGTG AGCGGCCATG TGGAAACCTG CCACTCCTAC
ACCAACGACC AGAACCTGAT AGACAACTAC CACAAGGCGG ACCGCCGCGG GCGGAGCGCC
CCGTTGAACA TGGTCATCAC CGAGACCGGC GCCGCTAAGG CCGTCGCCAA GGTGCTTCCG
GAGCTGACCG GGAAGCTGAC CGGCAACGCT ATCCGCGTGC CGACCCCGAA CGTCTCGCTG
GCGATCCTGA ACCTGCAGCT CAAGTCGGAA ACCGACGTCG CGACGTTGAA CGGCTACCTG
CGCGCCATGT CGCTCGACTC GCCGCTGCAG AACCAGATCG ACTACACCAA TTCCCCGGAC
GTCGTTTCCA GCGACATGGT CGGTTCGCGC CACGCTGGCG TGGTCGACTC TCTGGCCACC
ATCGTCCAGG GCAACCGCTG CGTCCTCTAC GTCTGGTACG ACAACGAGTT CGGCTACAGC
TGCCAGGTCG TGCGCATGGT ACAGAAGATG GCAGGCCTGG AACTTCCGGT GCTGCCGGCA
TAA
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| Protein sequence | MIMKKQEAYL KEWQGHEELA EQMLPIIGRL YRDHNIVTTV YGKSLVNIPT IDILKAHRFA
RLILDGELTV QETFPILEAI GKMDLAPARI DLGRLAVRYQ SQQGGSVADF LSRELASVNT
GRTPLLDEPQ DIVLYGFGRI GRLVARILVE KSGSGEKLRL RAAVVRKGGP DDLVKRASLL
RRDSVHGPFN GIITIDEEEN AIIANGNMIR IIYADAPENV DYAQYGIHNA IVIDNTGKWR
DREGLGRHLK ASGVSQVVLT APGKGDIPNV VFGVNNELIT STESIFSAAS CTTNAIVPVL
KAVSDNFGIV SGHVETCHSY TNDQNLIDNY HKADRRGRSA PLNMVITETG AAKAVAKVLP
ELTGKLTGNA IRVPTPNVSL AILNLQLKSE TDVATLNGYL RAMSLDSPLQ NQIDYTNSPD
VVSSDMVGSR HAGVVDSLAT IVQGNRCVLY VWYDNEFGYS CQVVRMVQKM AGLELPVLPA
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