| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3733 |
|---|
| Symbol | |
|---|
| ID | 6780597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 4259021 |
|---|
| End bp | 4260052 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642769728 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_002140521 |
|---|
| Protein GI | 197120094 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAGCC CCCTGTCCGT CGCCATCATC GGTGCTGGGC AGATAGCCGG CGGCTACGAC
CTCGCCAAGC TCCCCGGCGA CCCGGGCGTT TACACCCACG CCGGTGCCTA CCGGGCCGAC
GGGAGGTTCC GGCTGGCGAC CGTTTGCGAC CTCGACGCGT CCCGTGCCGA GACCTTCCGG
CAGCAATGGA ACGTGGAAAG GGCAATCTCG GAGGTCCAGG GTGTGGTGAA AAGCTTCCAT
GATGTGGTCA GCGTCTGCAC CCCCAACGAC TATCACTTCG AAGTGGTCAC CGACCTGATC
CGGAACGGAT CCTGCAAAAC ACTCTTCGTG GAAAAACCGC TGGCCCTGGA GCTGGCGCAG
ATGGAAGAGG TGGGGAGAAT GGCTCAGGAA CAAGGGGTGA ACGTGGTGGT CAACTTCCAG
AGGAGGTTCG ACCCGAGCCA CCAGGCGATC AGGGAGGACC TTGCGCGCGC GCCCCGCCGC
CTGCTCGCAG CCAACTGTTT CTACATCAAG GGGTTGGAGC ACATCGGCAG CACCATGATC
GACACGCTGA TCTTTCTTTT GGGTGAGCCC GAACGGGTGC TCGGCTTCCG GCGCGTCTTC
AACCCTGCGG TACGGGAGTA CAGCTACGAT TTCGCATTGA TGTACGAGGA TTTCGGCGTC
ACCGTCAGGA CCGCCGACTC GCCCGCAGCG GATTACCACT ACCACATCTT CGAGATCGAC
CTGCTGCTCA CCGACCGGCG GGTCACCATC AATGACAACT CCCGCAGCAT AGAGACCAGG
AGCCTCGGAT CCTATGCCTA CGGCGGAGTA AACACCCTCA ACGACCGCGC GCCGGTGCGC
ACCGGGACGG GGTACCCGCG CTCCATGTGC GGCTGCGTGG ATTACCTGCA CCAAGTGACC
ACCGGCGTCC GCCCGCACAC CGTCAACACC CCGGAGGACT CCTGCCGCAG CAAGGTGATC
GTGGAGGCGG TCCGCCTATC ATACGACCTG GGCCACGCCC TGGATATCGG AGAACACCCA
TGGAAAAAGT AA
|
|---|
| Protein sequence | MPSPLSVAII GAGQIAGGYD LAKLPGDPGV YTHAGAYRAD GRFRLATVCD LDASRAETFR
QQWNVERAIS EVQGVVKSFH DVVSVCTPND YHFEVVTDLI RNGSCKTLFV EKPLALELAQ
MEEVGRMAQE QGVNVVVNFQ RRFDPSHQAI REDLARAPRR LLAANCFYIK GLEHIGSTMI
DTLIFLLGEP ERVLGFRRVF NPAVREYSYD FALMYEDFGV TVRTADSPAA DYHYHIFEID
LLLTDRRVTI NDNSRSIETR SLGSYAYGGV NTLNDRAPVR TGTGYPRSMC GCVDYLHQVT
TGVRPHTVNT PEDSCRSKVI VEAVRLSYDL GHALDIGEHP WKK
|
|---|
| |