| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3538 |
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| Symbol | |
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| ID | 6780401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4051348 |
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| End bp | 4052307 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642769533 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_002140327 |
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| Protein GI | 197119900 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATGA ACTTTTTGCC TGAAGATGCG GTGACCGTCC TGGCGGCGGT GGCGCTCGAT
CTGGTGCTGG GCGACCCGCG CCGGCTGCCG CATCCGGTGG TTGCCATCGG GAAGATGATT
TCCTCCCTGG AGGGGGGGCT GCGCCGGGTC TTCGGCAACC TCCGCGCGGC GGGGGTAGTT
CTACTCCTGG TCACTGTCGG CGTGAGCTAC GGCGCTGCGG CGCTCCTTTT GTACGGTGCC
GCGCTCATTT CGCCCGCTGC GGCTTTCGTC GCCGGGGTGT ACCTCGCCTG GGTCTCGCTC
GCCGCGCGCT CGCTGCACGT GGAGTCGGCC AAGGTGGCGC AGGCGCTGAA GCGGGGCGAC
CTGCCGGGGG CGCGGTTGGC GCTTTCCTAC ATCGTGGGGC GGGAGACTGC CGGGCTGGAC
GAGCCGGAGA TCGTCCGCGG GGCGGTGGAG ACGGTGGCCG AGAATACCGG GGACGGCGTG
ATCGCGCCGC TTTTCTACCT GATGCTAGGC GGCCCTCCTC TCGCCATCGC TTACAAGGCG
GTTAACACGC TCGACTCCAT GGTGGGGTAC AAGAACGAGC GCTATCTCGA GTTCGGCTGG
GCCTCGGCCC GCTTCGACGA CCTCGCCAAC TACATCCCGG CCCGGCTCAC GGGGCTCCTC
ATGGTTCTCG CTGCCCCTTT CTGCGCCTTA AGCGGCAGCG GCGCCTGGCG CATCATGCGC
CGCGACGGTC GCAACCACTC TTCCCCCAAC AGCGGCTACC CGGAGGCCGC GGCAGCAGGC
GCGCTCGGGG TGAGGCTCGG GGGCGCCAAC CGCTACTTCG GCAGGGTCGT TGAGAAGCCG
ACCATCGGGG ACCCTGCGGT GCCGCTTACA CTCGCGGCCT ACAGCGGCGT GGTGCGGCTT
ATGTATGGCA GCGAACTCCT TTTGGTCTTG TTGTGTTTAG TTGCGATGGC CTTCCGTTAA
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| Protein sequence | MSMNFLPEDA VTVLAAVALD LVLGDPRRLP HPVVAIGKMI SSLEGGLRRV FGNLRAAGVV
LLLVTVGVSY GAAALLLYGA ALISPAAAFV AGVYLAWVSL AARSLHVESA KVAQALKRGD
LPGARLALSY IVGRETAGLD EPEIVRGAVE TVAENTGDGV IAPLFYLMLG GPPLAIAYKA
VNTLDSMVGY KNERYLEFGW ASARFDDLAN YIPARLTGLL MVLAAPFCAL SGSGAWRIMR
RDGRNHSSPN SGYPEAAAAG ALGVRLGGAN RYFGRVVEKP TIGDPAVPLT LAAYSGVVRL
MYGSELLLVL LCLVAMAFR
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