Gene Gbem_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3512 
Symbol 
ID6780375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4023721 
End bp4024497 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID642769507 
ProductTonB family protein 
Protein accessionYP_002140301 
Protein GI197119874 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00623688 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAC AGCTGACACG CCGATACCCG GGGCCGCAGG GGATGTTCGC GCTCTCCTTC 
GTCTGCCACC TGGTCGTGTT TCTGATCATA GCCAAGTGGC AACTCTCACC GGAATTACAT
CCGGACGACA CCCCGGTCAC CTACGTAGAC ATGGTCACCC TCCCCGTCGC CTCGCCTCAG
GCCGGCACCC CCGCGCCTGC GGCCGAGGCG GAGAAGGAAG CTGCCCCTCC CCCGCCTGCC
GCGCCTGCTG CACCGGCCAT GGTGCAGCCC GCCAAACCGG CGAAGCCCGC GAAACCTGCG
GCCAAGGCTC CGGCGGCGGA GCCCAAGGGG AAGTCCGCGC CGGCGAACCC CGCGGCCCAG
GCGCAGGAGT TCAACGAGCG GCTGGCGAAA CTGGAGCGGG TCGCCCAGGA TAAACGGCAG
GCCGAGGTCA TGGAGCGGCT GAGGAAGAAG GGAAGCCAGC AGACCGGGAT GCCCGGGGCC
AAGGGAACCG AGGCCGGGAG CGACTACCCC TCGTACCTCC AGTCCCGCCT CAAGGATGCA
CTCAAGGAAG TCATGGTCTC GCAGACCAAG TCGCCGCAGG TGATCGCAAC CATCACCGTG
TCCGGCGACG GCAGGATCGC GGAATACCAT GTGGAAAAGG GATCAGGGGA CCCGCTTTTT
GACGATGCGG TCCATCGGGC CGTGACGCTG GCCGGCAAAT CGCTGGTCCC ACCGCCGGGC
GGCGCGCCGT TCAAGCGCAT GTTCCGCTTC AGACCGGAAG GGGTCGGTAT CAGATGA
 
Protein sequence
MRKQLTRRYP GPQGMFALSF VCHLVVFLII AKWQLSPELH PDDTPVTYVD MVTLPVASPQ 
AGTPAPAAEA EKEAAPPPPA APAAPAMVQP AKPAKPAKPA AKAPAAEPKG KSAPANPAAQ
AQEFNERLAK LERVAQDKRQ AEVMERLRKK GSQQTGMPGA KGTEAGSDYP SYLQSRLKDA
LKEVMVSQTK SPQVIATITV SGDGRIAEYH VEKGSGDPLF DDAVHRAVTL AGKSLVPPPG
GAPFKRMFRF RPEGVGIR