| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3444 |
|---|
| Symbol | |
|---|
| ID | 6780306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3956065 |
|---|
| End bp | 3957276 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642769438 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002140233 |
|---|
| Protein GI | 197119806 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2006] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCT TACTGAAGCC GAACTGGGTT CTTCACAAGA ATTACAGTAG CCAAGGAAAC
GATTGCCTGG TGACGCACCC CAACGTTATC GAGGCAGTCT TGCTGGAGGT GCTCAAGGCG
AAGCCGGGCC GGGTCGTCAT CGGCGATGCT CCCATCCAAG AGTGTGACTT CGACATGCTG
GTGCCGCATG AATGGCGTGA GAGGATGCAA AGCCTGGCAT CCTGTCCGGT CGACATCGTC
GACTTCCGCC GCACCGTCCT TCGCAAAGGC GGCTTCGGCG AAGGGCAGGA TCGCGAGCTT
CGGGGTGAAG ATCGCTATCT CCTTTTCGAC CTGGGAAAAG ACAGCCTGCT GGAGCCCGTT
TCAACGCCGG AGAGCCGCTT TCGAATCACC TGTTACGATC CGGATCTGCT GGCCCGGCGC
CACCACAAGG GGAAACACGA GTACCTGCTC GCAAAGGAAC CGTTTGAGGC CGATGTCATC
ATCAACCTGC CCAAGCTGAA GTGCCACAAG AAGGCGGGGA TGACCGGCGC ATTGAAAAAC
ATCGTCGGGC TGAACGGCAA CAAGGAATTT CTGCCGCACC ACCGGCTGGG CGGCAAAGGG
GATGGCGGGG ACTGCTATCC CGGCCAGTCG GTGCTGAAGT CCATGGCCGA GCGTTGCTTT
GACGAGGCCA ACAGAGTCAT AGGCACCCAG CAGTGCCAGC GGTGGCTGAA GCGGTCCGGG
CGGCTGATCC GGATTCAGAG CCTCGTGGGA AATCCTGAGA TCGAAGGTGG GTGGCATGGC
AATGATACGG TGTGGCGCAT GACGCTGGAC CTTAACCGAC TGCTACTTTA CGGACGCGCT
GACGGGACAA TGTCGGACAC TGCTGTGCGC CGTGTTTACT CGTTTACCGA TGCCGTCATT
GCCGGCGAGG GGGAAGGGCC CTTGGCCCCA CGCCCCGTCA CCCTCGGAGT CCTGTCCTTT
GCGGCGTCAT CGGCATTCGC CGATTTGGTG GGTGCGTCGC TGATGCAATT CGACTGGCGG
AAGATACCCG CGGTGCGGGA GGCTTTTGGG CATTTCCGTT ACCCGTTGAC CGGGCTGTCC
CCCGACGGGT GCCGGGTGAT CTGCAACGGA GAAAAGATGT CTCCTGAAGA GGCCGCAAAG
CGGTTCGGGA AGGCGTTCCT GGCCTCTGCC GGCTGGCGTG GCCACATAGA GCGGGAAGGG
AGCGGTAAAT GA
|
|---|
| Protein sequence | MTVLLKPNWV LHKNYSSQGN DCLVTHPNVI EAVLLEVLKA KPGRVVIGDA PIQECDFDML
VPHEWRERMQ SLASCPVDIV DFRRTVLRKG GFGEGQDREL RGEDRYLLFD LGKDSLLEPV
STPESRFRIT CYDPDLLARR HHKGKHEYLL AKEPFEADVI INLPKLKCHK KAGMTGALKN
IVGLNGNKEF LPHHRLGGKG DGGDCYPGQS VLKSMAERCF DEANRVIGTQ QCQRWLKRSG
RLIRIQSLVG NPEIEGGWHG NDTVWRMTLD LNRLLLYGRA DGTMSDTAVR RVYSFTDAVI
AGEGEGPLAP RPVTLGVLSF AASSAFADLV GASLMQFDWR KIPAVREAFG HFRYPLTGLS
PDGCRVICNG EKMSPEEAAK RFGKAFLASA GWRGHIEREG SGK
|
|---|
| |