| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3228 |
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| Symbol | |
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| ID | 6780086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3715301 |
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| End bp | 3717130 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769222 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_002140023 |
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| Protein GI | 197119596 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTCACT GCGTCTTCAC TGACACACCA AAACCCGCAT CGAGGTTTCG TTTCTTCCCT
CCTTTCAGCA CGAATCCTTC CCCCGCCGCC GGCAACCGGG CGCTTTTCTC GCTCCTTCTG
CTGGTCCTGC TGCTCTCTCT GGCCCCGCTT GCTCAGGCGC AGCAATCCGC CCCGGTCCAC
TACGACCCCG CGGCCACCAT CGTGGTCGGC GGCGACCGCT CCTATCCTCC GTACGAATTC
ATCGACAAGG ACGGCCGCCC GGCAGGCTAT AACGTGGATC TCACCAAGGC GATCGCCGAG
GTGATGGGGA TGAAGGTGGA ATTCCGCTTC GGAAGCTGGG CGGAGATGCG CGCAGGTCTC
CAGCAGGGAA AGATCAACAT CCTGCAGGGG CTCTCCTATT CGGATGAGCG CTCCCGGAGC
GTCGACTTCT CGCCCCCCCA CGCCATGGTG CACCACGCCA TCTTCGCCCG CAGGGACTCG
AAACGGGTCC GCACCCTGGA GGAACTGAAG GGGAAGAAGG TGATCGTCTT CCAGGACGGC
ATCATGCACG AGCGCTTGAA GCTCTTAGGC TTCGGGAAGG ACCTGGTGCT CACCCCGACG
CCTGCGGAGG CCCTCAGGCT TTTGGCCTCG GGTCAGTACG ACTACGCGGT GGTGGCGCAA
CTCCCGGGGA TGTACCTGAT CCGCGAACTG CACTTGACCA ACCTGGTTCC GGTGGCAAAG
GCCGTGGTGA GCGAGCAGTA CGGCTACGGA GTCGCCAAGG GGAATAAGGA GCTTCTGACC
CGCTTCAACG AGGGGCTCGC CATCGTCATC AAGACCGGCC AGTACGCCCA GATCTACAAC
AGGTGGCTCG GCGTGCACGA GCCTCCCCGG GTCACCAGGG AGATGGCGCT CAAGTACGGC
GCCATGATCC TGGTGCCGCT TTTGCTGGTC TTGGCGGGGA CCGCGCTTTG GAACAAGACG
CTGCACAAAC GTGTCGTCGA GCGCACCACC GAGCTGGCGC AGGAGGTCTC GGAGCGCAAC
AAGGCTCTGG AGGCGTTAAG GCGCCACCAG GACAAGCTGA TCCAGGCCGA CAAGATGGCC
TCTCTCGGGA CGCTGGTTTC CGGCGTCGCC CACGAGATCA ACAACCCCAA CGGCCTCTTG
CTGCTTGATA TCCCGATTCT GCGGCGCGTG CACGAGGACG CGGAGGAGAT CCTCGAAGCC
CGCTACCTGC AGGAGGGGGA TTTCATGCTC GGGGGAGTTC CGTATTCCGA GATGCGCGAG
GAGATCCCGC GCATCCTGGA GGAGATGCAG GACGGGGCGC AGCGCATCAA GAGGATCGTG
AACGATCTGA AGGACTTCGC GCGGCGCGAC GACGCAGGCT ACATGGAGCC GATCGACGTG
GAGGCGGCAG CCAAGAGGGC CGTGCGCCTG GTCGAGCCGA CTATACGTTC CGCGACCAAC
AGGTTCGAGG CGCTTTATGC GGGGAACCTC CCGCCGGTAT TGGGCAACGC GCAGCGCATA
GAGCAGGTCA TCGTCAACCT GGTGCTCAAC GCCTGCCAGT CCCTCCCCGG CCGGGACCAG
GGGGTGACGC TTACCACCTC GCTGGACAGC GAGAGCGACA GCGTGCTGAT CGAGGTGCGG
GACGAAGGGG TGGGGATAGC GCAGGAGCAC CTGCCGCAGC TAGTGGATCC CTTCTTCACC
ACCAAGCGGG AGACCGGAGG CACCGGGCTC GGCCTCTCCG TCTCCGCGGG AATCGTCAAG
GAGCACGGGG GGACGCTCTG CTTCGCGTCG ACGCCGGGGG AGGGGACCAC GGTCACCCTT
TCCCTTCCCG TTACTTCCAG GAGGTCGTGA
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| Protein sequence | MSHCVFTDTP KPASRFRFFP PFSTNPSPAA GNRALFSLLL LVLLLSLAPL AQAQQSAPVH
YDPAATIVVG GDRSYPPYEF IDKDGRPAGY NVDLTKAIAE VMGMKVEFRF GSWAEMRAGL
QQGKINILQG LSYSDERSRS VDFSPPHAMV HHAIFARRDS KRVRTLEELK GKKVIVFQDG
IMHERLKLLG FGKDLVLTPT PAEALRLLAS GQYDYAVVAQ LPGMYLIREL HLTNLVPVAK
AVVSEQYGYG VAKGNKELLT RFNEGLAIVI KTGQYAQIYN RWLGVHEPPR VTREMALKYG
AMILVPLLLV LAGTALWNKT LHKRVVERTT ELAQEVSERN KALEALRRHQ DKLIQADKMA
SLGTLVSGVA HEINNPNGLL LLDIPILRRV HEDAEEILEA RYLQEGDFML GGVPYSEMRE
EIPRILEEMQ DGAQRIKRIV NDLKDFARRD DAGYMEPIDV EAAAKRAVRL VEPTIRSATN
RFEALYAGNL PPVLGNAQRI EQVIVNLVLN ACQSLPGRDQ GVTLTTSLDS ESDSVLIEVR
DEGVGIAQEH LPQLVDPFFT TKRETGGTGL GLSVSAGIVK EHGGTLCFAS TPGEGTTVTL
SLPVTSRRS
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