Gene Gbem_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3195 
Symbol 
ID6780054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3684596 
End bp3685378 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID642769191 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002139992 
Protein GI197119565 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.583416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACA GAAGAACTTT TTGCAAGAAC ACGCTGCTCA TCGCCGGGGG CCTCGCGCTC 
CCGCTCTCGG CGCTGGAACT CTTCGACCCG AAGCGGCTTT TGGCCGAGAA GGACCAAAAA
GGGGCGCGCT GGGTGTTCCT GGTGGACACC CGCAAATGCG TCGGCTGCGG TTTCTGCGTC
AAGGGGTGCA AGGTGGAGAA CGAGGTTCCC TATGACGCCA ACGTGACCCG CACCTGGGTC
GAGCGCTACC TGGTCACCAG CGACAGCAAG ACCCACATCG ACTCCCCCAA GGGGGCGCGC
GACGGCTTCC CAAGGAAGGA GGTCGAGATA GGGCACGGAA AGCTGGAGGA GGTCCGCGAC
GAGGATCTCG AGAAGGCGTT CTTCGTCCCC AAGCTCTGCA ACCAGTGCGA CAATCCCCCC
TGCGTCCAGG TCTGCCCGGT GGGGGCGACC TACCAAACCG AGGACGGTGT GGTGCTGGTG
GACCGTAGCT GGTGCATCGG CTGCGGCTAC TGCATCATGG GGTGCCCATA CGGGGTCCGC
TTCTTCCACC CGGTGTACCA CGTGGCCGAC AAGTGCAACT TCTGCTACCA CCGGATCAGC
AAGGGGATGC AGACCGCCTG CGTGGACAGC TGCGCTTTCG GGGCCAGGCG CATCGGGAAC
CTCAGGGACC CCGAGGACCC GGTCACCAAG GTGATCATGA CCGAGCGGGT CAACGTCCTC
AAAGAGGAGT ACGGCACCAA GCCGCAGGTC TTCTACCTGG GGCTTTCCAA GGAGGTGAAG
TAG
 
Protein sequence
MIDRRTFCKN TLLIAGGLAL PLSALELFDP KRLLAEKDQK GARWVFLVDT RKCVGCGFCV 
KGCKVENEVP YDANVTRTWV ERYLVTSDSK THIDSPKGAR DGFPRKEVEI GHGKLEEVRD
EDLEKAFFVP KLCNQCDNPP CVQVCPVGAT YQTEDGVVLV DRSWCIGCGY CIMGCPYGVR
FFHPVYHVAD KCNFCYHRIS KGMQTACVDS CAFGARRIGN LRDPEDPVTK VIMTERVNVL
KEEYGTKPQV FYLGLSKEVK