Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3179 |
Symbol | |
ID | 6780038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3666427 |
End bp | 3667761 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642769175 |
Product | hypothetical protein |
Protein accession | YP_002139976 |
Protein GI | 197119549 |
COG category | [S] Function unknown |
COG ID | [COG3876] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0164032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGACTGT TTCGCGTTTT GCCCTACCTG TTGTCCCTAT CACTGATGCT GACCCTTTTC TCCCCCCCCC CTTCCCAGGC CGCACTGGTG AAAACCGGAG CGGAGGTACT CGCCGAGCAG AACTTCCTGC CGCTCAGGGG GAAGAACTTC GCCCTGGTGA CCAATCACTC CGCCATGGTG GGGGAGGTGC ACCTGCTGGA CCTTATGAAA AGCAAGGGTT TACAGCCGGC GGTGATCTTT ACCCCGGAAC ACGGCCTGAA AGGGACCGCC GAAGACGGGG TGCACCTGGC GGACGACTCC AGCGACGGCA TCCCGGTGAT AAGCCTCTAC GGTGCGGTGA AGCAGCCCCG CCAGGAGGAC CTCAAGGGAA TCGACCTGAT CGTCTTCGAT ATCCAGGATG CGGGGGTGCG CTTCTATACC TACATCTCGA CCATGGGGCT TGCCATGCAG GCTGCCGCCC GGGACGGGAT TCCCTTCATG GTGCTGGACC GCGCCAACCC GCTGGGAGGT GATTACGTCG GAGGGTTCCT GAGGGACGGG ATACCGGCGA GCTTCACCTC GCTCTACCCG ATCCCGATTG CCCATGGCAT GACTGTGGGC GAGCTTGCCG GCATGATTAA AGGGGAGGCG ATGCTGCCGG GACTCGCGCA ACTCGACCTG AAGGTGGTGC GGATGCAGGG GTGGCAGCGC GCCATGCGCT GGCCCGACAC CGGCCTTTCG TGGGTGGCGA CCAGCCCCAA CCTCGCCTCG TTCGAATCCG TGCTCCTTTA CCCGGGAACC GGCCTTTTGG AGGGGACCAG CGCCTCCGAG GGGCGCGGCA GCACTCTCCC CTTCCAACTG GCGGGGTGGC CCGGCATCGA CCCCCTGGCG CTCGCGGCCC GGCTGAACGG CGAACAGTTG CGGGGAATCC GTTTCGAGCC GGTGCAGTTT ACGCCGGTGA GGATCCCCGG GGTATCGAGC GTGCCCAAGT ACCGGGACCG AGAGGTGAAT GGGGTGAGGA TCGATATCAC CGACTACAGC AAGGTCTTGC CGGTGGAGAC CGGAATCGCG GTCCTGAGCG CGCTGCACGC CTTGGTACCG GAGCCGGTGC GCCCCTCCTT CTTCAGGGCG GGGTTCGACG ACATGGCGGG TTCGGCTGAG TTGCGCAAGG CGGTGGAGCA GGGTGAGAGC GCCGCCGGCA TCTCGGCACG CTGCAACGGC GAGCTCTCCA GGTTTCTGGC ACTGCGCGAA GCGTACCTTT TGTACGGCGA TGAGCCCGCT TCAACGGCCG GTGCTGCGGG GAAGGCGACG GATGCATCCG GTTTGGCTCA AAAAGAGGGG CACCCATCGC GGTAA
|
Protein sequence | MRLFRVLPYL LSLSLMLTLF SPPPSQAALV KTGAEVLAEQ NFLPLRGKNF ALVTNHSAMV GEVHLLDLMK SKGLQPAVIF TPEHGLKGTA EDGVHLADDS SDGIPVISLY GAVKQPRQED LKGIDLIVFD IQDAGVRFYT YISTMGLAMQ AAARDGIPFM VLDRANPLGG DYVGGFLRDG IPASFTSLYP IPIAHGMTVG ELAGMIKGEA MLPGLAQLDL KVVRMQGWQR AMRWPDTGLS WVATSPNLAS FESVLLYPGT GLLEGTSASE GRGSTLPFQL AGWPGIDPLA LAARLNGEQL RGIRFEPVQF TPVRIPGVSS VPKYRDREVN GVRIDITDYS KVLPVETGIA VLSALHALVP EPVRPSFFRA GFDDMAGSAE LRKAVEQGES AAGISARCNG ELSRFLALRE AYLLYGDEPA STAGAAGKAT DASGLAQKEG HPSR
|
| |