Gene Gbem_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3179 
Symbol 
ID6780038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3666427 
End bp3667761 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content65% 
IMG OID642769175 
Producthypothetical protein 
Protein accessionYP_002139976 
Protein GI197119549 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0164032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGACTGT TTCGCGTTTT GCCCTACCTG TTGTCCCTAT CACTGATGCT GACCCTTTTC 
TCCCCCCCCC CTTCCCAGGC CGCACTGGTG AAAACCGGAG CGGAGGTACT CGCCGAGCAG
AACTTCCTGC CGCTCAGGGG GAAGAACTTC GCCCTGGTGA CCAATCACTC CGCCATGGTG
GGGGAGGTGC ACCTGCTGGA CCTTATGAAA AGCAAGGGTT TACAGCCGGC GGTGATCTTT
ACCCCGGAAC ACGGCCTGAA AGGGACCGCC GAAGACGGGG TGCACCTGGC GGACGACTCC
AGCGACGGCA TCCCGGTGAT AAGCCTCTAC GGTGCGGTGA AGCAGCCCCG CCAGGAGGAC
CTCAAGGGAA TCGACCTGAT CGTCTTCGAT ATCCAGGATG CGGGGGTGCG CTTCTATACC
TACATCTCGA CCATGGGGCT TGCCATGCAG GCTGCCGCCC GGGACGGGAT TCCCTTCATG
GTGCTGGACC GCGCCAACCC GCTGGGAGGT GATTACGTCG GAGGGTTCCT GAGGGACGGG
ATACCGGCGA GCTTCACCTC GCTCTACCCG ATCCCGATTG CCCATGGCAT GACTGTGGGC
GAGCTTGCCG GCATGATTAA AGGGGAGGCG ATGCTGCCGG GACTCGCGCA ACTCGACCTG
AAGGTGGTGC GGATGCAGGG GTGGCAGCGC GCCATGCGCT GGCCCGACAC CGGCCTTTCG
TGGGTGGCGA CCAGCCCCAA CCTCGCCTCG TTCGAATCCG TGCTCCTTTA CCCGGGAACC
GGCCTTTTGG AGGGGACCAG CGCCTCCGAG GGGCGCGGCA GCACTCTCCC CTTCCAACTG
GCGGGGTGGC CCGGCATCGA CCCCCTGGCG CTCGCGGCCC GGCTGAACGG CGAACAGTTG
CGGGGAATCC GTTTCGAGCC GGTGCAGTTT ACGCCGGTGA GGATCCCCGG GGTATCGAGC
GTGCCCAAGT ACCGGGACCG AGAGGTGAAT GGGGTGAGGA TCGATATCAC CGACTACAGC
AAGGTCTTGC CGGTGGAGAC CGGAATCGCG GTCCTGAGCG CGCTGCACGC CTTGGTACCG
GAGCCGGTGC GCCCCTCCTT CTTCAGGGCG GGGTTCGACG ACATGGCGGG TTCGGCTGAG
TTGCGCAAGG CGGTGGAGCA GGGTGAGAGC GCCGCCGGCA TCTCGGCACG CTGCAACGGC
GAGCTCTCCA GGTTTCTGGC ACTGCGCGAA GCGTACCTTT TGTACGGCGA TGAGCCCGCT
TCAACGGCCG GTGCTGCGGG GAAGGCGACG GATGCATCCG GTTTGGCTCA AAAAGAGGGG
CACCCATCGC GGTAA
 
Protein sequence
MRLFRVLPYL LSLSLMLTLF SPPPSQAALV KTGAEVLAEQ NFLPLRGKNF ALVTNHSAMV 
GEVHLLDLMK SKGLQPAVIF TPEHGLKGTA EDGVHLADDS SDGIPVISLY GAVKQPRQED
LKGIDLIVFD IQDAGVRFYT YISTMGLAMQ AAARDGIPFM VLDRANPLGG DYVGGFLRDG
IPASFTSLYP IPIAHGMTVG ELAGMIKGEA MLPGLAQLDL KVVRMQGWQR AMRWPDTGLS
WVATSPNLAS FESVLLYPGT GLLEGTSASE GRGSTLPFQL AGWPGIDPLA LAARLNGEQL
RGIRFEPVQF TPVRIPGVSS VPKYRDREVN GVRIDITDYS KVLPVETGIA VLSALHALVP
EPVRPSFFRA GFDDMAGSAE LRKAVEQGES AAGISARCNG ELSRFLALRE AYLLYGDEPA
STAGAAGKAT DASGLAQKEG HPSR