| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3178 |
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| Symbol | |
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| ID | 6780037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3665071 |
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| End bp | 3666282 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769174 |
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| Product | peptidase M20 |
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| Protein accession | YP_002139975 |
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| Protein GI | 197119548 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0110526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGGC GCCTGGAGGA GGTTTTCGCC GCCATCGATC CGGCACGTCT CAAGGGAACC
CTGCTGGAGA TGCTGGACAT ATATTCCCCC TCGGGGAAGG AGGAGGACAT CCAGCTCTAC
CTCGAGGACC TGCTCGCTGG CGCCGGGTTC TACGTCGAGC GGCAGGAGGT GGAGGAGGAG
CGCTACAACC TGCGGGTGAC CATGGGGGAA GGCGAGCCTG AGCTTTACCT CGTGGGGCAC
GTGGACACGG TTCCGGCGTG GGACCTGGAG GAATTCGGCG CCAGGGTGGA AGGCGACGCC
ATCGGAGGGC TGGGGAGCGC CGACATGAAG GGGGGGTGCG CCGCCATGAT CGAGGCGTGG
CTCGCCATGG CCCAGGCCTT GAAACCGGGC CGGCGCCCGA ACGTGGGGCT TTTGCTTGTG
GTGGGGGAGG AGGAGAACGG CGACGGCAGC GCCAGTTTCC TGAAAAACTG CAGTCCCGCC
TGGGCGGTGA TCGGGGAGCC TACCGGCCTC TCAGCCTGCT TCGCCCACTA CGGCTACCTG
GAGGCCGGCT TCGTCACCCA CGGGTTGAGG AGCCACTCCT CCTTGCCGGA ATTGGGGCAC
AACGCGGTGG AATCGATGCT GAGGGTGCTT TTGCACTTAA GCAAGGACCC GCTGTTCCAC
CGGGAGCAAG GGAGCATCGT CTACTCCATC AGGGAGATGC ACTCCTCCCA GAAGGGGTTC
GTGGTCCCGG ACCGGTGCGA ATCCTGGATC GACCTGCATC TTCCCCCAGA GCTCGACCCG
GAGTCCGTGC AGCGGGGAAT TAGCCATATC GTCTCCAGCG CAGGTCAATA CATACCCGGT
CTAGACTTAA ACGTCGCCTT CAATTTCGCC TCGGCCGGCT ACAACCTCGG TACCGACAAC
CCACTTTCCT GCATCCTGGA ACAGGTCTAC CAGCGCCTTG GGCGCACCCT CAAATTCGAT
TCCTTCCGCT CGCACTCCGA CGGCAACCTC TTCTACGCCG CCGGTTGCCG ACCGCTGATC
CTGGGCCCCG GCGCACTGGA GATTTCGCAC ACCCCCGAAG AACAGGTCGA CTTCCCCGAG
GTCTTGGCGG CGGCACAGAT CTATGCCGCG CTTTGCTTGG GGCTCGACCG GTACGCGGTG
CTGAACGTGG AGCGCTGCGG CTCCTGGGCT TCGTTCGACA GGCAGGGGAG CTGGGTGGGT
TGCCGGGATT AG
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| Protein sequence | MTGRLEEVFA AIDPARLKGT LLEMLDIYSP SGKEEDIQLY LEDLLAGAGF YVERQEVEEE
RYNLRVTMGE GEPELYLVGH VDTVPAWDLE EFGARVEGDA IGGLGSADMK GGCAAMIEAW
LAMAQALKPG RRPNVGLLLV VGEEENGDGS ASFLKNCSPA WAVIGEPTGL SACFAHYGYL
EAGFVTHGLR SHSSLPELGH NAVESMLRVL LHLSKDPLFH REQGSIVYSI REMHSSQKGF
VVPDRCESWI DLHLPPELDP ESVQRGISHI VSSAGQYIPG LDLNVAFNFA SAGYNLGTDN
PLSCILEQVY QRLGRTLKFD SFRSHSDGNL FYAAGCRPLI LGPGALEISH TPEEQVDFPE
VLAAAQIYAA LCLGLDRYAV LNVERCGSWA SFDRQGSWVG CRD
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