| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3174 |
|---|
| Symbol | |
|---|
| ID | 6780033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3656783 |
|---|
| End bp | 3657709 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642769170 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002139971 |
|---|
| Protein GI | 197119544 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA TCTGTCCTAA CTGCCACCAC CGGCACCGGG GGCACATACC TCAAAGCACG
ATTACGCCTT TTTCACTGGT CTGCGCCCGA TGCTCCACGG AGTTCCTGGT GAACTGGAAA
ATCAGGCTGG CAGGAAAGAC GGACGACACC ATCGTCGTCT GTTCCTGGTG CGCCGCAAAG
CAACCGGACT CCGATCGATG CCAATACTGC GGGCGCCCCT TCTATGACTA TGCCCACTGC
AGGCAAACGC CAAGAAGAGC ACCGAAGGCC AACCCAAAAC GACGCGACGA AAAACCGGTT
CAGGCTCAGC GGGCCGCACA AGGGGTTCCC GATACGCGGC GGGTGGCGGG TAGATTCCCT
TCTGCCGCCA GACGGAAAAT CTGCATGCTG GCATTAACGG CAATAGCTGT TCTTGGTATC
TCGCTGAACT CCTTCTGGCA CAAAAACAGC GAACAGCAGT ACCTGACCAA TTACGTGATC
GCGCTTTACG GCATCCGGTC CGGGCTTGAG TTGAGCGGCA GGACATGCAG CGACATCGCC
GCCGACTGGC AGAAGGACCT CGATGCAGGG AGGGAGGTGT CGAACGATAT AAGCAGGAAG
GAATCGGAAG ACCTGGCGAC AGTGAAGCGC GAGATCGACC TGGTAATGAG CAAGCTGAAA
CCGGCTCCGG AGAAGTTGGG CAGAAGTAGT GCAAAGCTGC AAGAGATGTA TGACATCTAT
CTTGAGGTAC ACACCTTGGC GAACAGGCCC TTCGGCTCAC CAAAGAGCAT CATTTCGACG
GTCGACAGCT TAAAGACCGC TTTTCGGCTG AAGGTTCGCG AGCTGAAACA GATCATGCCC
CCGCAACTCT CAGACGAAAT CACCAAGTCG GCCGTCAAAT ACGATCTGAC TTTCCTGGAC
CAGGAAAACG CAACGGGGGA GAGGTAG
|
|---|
| Protein sequence | MKIICPNCHH RHRGHIPQST ITPFSLVCAR CSTEFLVNWK IRLAGKTDDT IVVCSWCAAK
QPDSDRCQYC GRPFYDYAHC RQTPRRAPKA NPKRRDEKPV QAQRAAQGVP DTRRVAGRFP
SAARRKICML ALTAIAVLGI SLNSFWHKNS EQQYLTNYVI ALYGIRSGLE LSGRTCSDIA
ADWQKDLDAG REVSNDISRK ESEDLATVKR EIDLVMSKLK PAPEKLGRSS AKLQEMYDIY
LEVHTLANRP FGSPKSIIST VDSLKTAFRL KVRELKQIMP PQLSDEITKS AVKYDLTFLD
QENATGER
|
|---|
| |