Gene Gbem_3117 details

Gene Information

• Locus tag: Gbem_3117
• ID: 6779976
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 3602106
• End bp: 3604262
• Gene Length: 2157 bp
• Protein Length: 718 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642769114
• Product: hypothetical protein
• Protein accession: YP_002139915
• Protein GI: 197119488

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGAACA AGCCTCTTGA TCTTGTATCT GCCGTAATCT CGCCTCTTAT CTTGCTGCTG 
CTGGCAGCCG GCAGCGTCTG CGCGGCAGAG GGGGACATAA TCGAGGTGCC GGTGGCGGAC 
GCAGACCTTT TGGAGGCGCC CCCCGAGCCG GAGCCGCAGC TGCTGGTGGA CCTGAACCCG 
CTCCCGGCCG AGTACGACCG GCAGGTCGAG GTGCTGGAGC AAAAGGGAGG CTCGCTCGGG 
TACAACTGGC TTTTCAAGGA TCGAAACGCC GGGCGAGCCC TTGAGTACGG CTTCTCGGAA 
TCCAGCCGCA GTGGCGGCGT GTTTTACCGG CACATGGAAA AGGACAGCAA CCTCGAGCTG 
GAAGGGTTCT ACCTCAACGA AAACGACTAT CACGGCGACC TGATCCTCGA CTACCGCGGC 
GACTACCGCC TGCATCTGAG GACCGAGTCG CTCTACCACA ACCTGGACCG CGAAATCCTG 
TTCTCCCCTT CTTTTCAGTC AGGGTCAAAC AGCGGCGGCT TAGCGACCTA TGAGCCGATA 
CAGCTCGACG CCGGCGCCAA GTACGGCGTC AGCGTGGTGC AGGACCGGGC CGACTTCCGC 
TACCGTCTGC ACGACTTTCC AATGCACCTG AACCTTGGCT ACTGGCGCTA CCAGAGGGAG 
GGGAGCGTGC AGCAGATCTT CTCCGACGCC TCCTTCGAGG GGACGGTGAA CCGGGTCTTC 
GCGCAGGCAA GGCCGGTGAA TCAGCAGGTC CAGGAAGGGC GCCTGGGTTT CGACGCCCAT 
CTCGGGCTGG TGGACGTCAT CTACGATTTC AAATTCCGCA GCTTCGAGGA CAAGCTCTCC 
ACCCCGGTCG CCGACTACGT GGCACGTCCC GATCTGGCCG GAAATCCCCT AACTCTGGCA 
GGGGCGCAGC AGCACAACGA AAACCCCGAC AGCCGTTTTT ACTCGCACAC GATAAAGCTG 
CACAGCTCCA TGTCCGGCGG GCTGGTAACC GGCGCCTCCT ACTCGGTGGA ACAGCGCGAG 
AATCTTTCCA AGCTGACCGA CACCGTCGGG GTACAGCACG CCAGGACCTA TCTGCAAAAC 
GCCGCCGGCG ACTTCGTCTA TACGCCCGAC CGCGAGTACA CCTTTTCCAT CAGATACCGG 
CGCCAGGAGG TGGAGCACGG AAACCGCGGC GCGGTCCTAA GTTCAAACCT GCTTCTTCCC 
GCAGCGCTGT CGCGCCCTCC CGTCGACACG GTGAAGGATC TCGTCATAGC CTCCGTCTCC 
TACAAGCCGC GGCTAAACCT CTCGCTGGTG GGTGAGTACC GCGGAGAGTT CCTGCAGAGA 
AAGCACGTTT CCCTGTTCCC GTCCGAGAGC AGTTGGGCCC TGCCGGAGAA TACCAACACC 
AACACCGGAT CGCTCGCGGT CCACTACCGC CCGATCAAGG GGCTGCGCAC CAGCGCCCAT 
CTGTCCTACG CCACGAGTGA CAATCCTTCC TATGGAGAGT CGTTTGGGGA AAGGCGCGAG 
GGTAAGCTTC TGGCGAACTA CACGCGCAGC AACGTATGGG GATTGACGGG CCACGCCCTC 
TTCAGGCATG ACAAAAACGA CGAGGTGCCG CACTACCTGG TGCTGTTGAA CCGGGCGAAT 
CCCGACCCGG TCAGCTACAC CGCCGCTCCC CTCTCCTTCA GAGACAAGCG CAGCGAGAAC 
TCGAACATAG GGGCATGGGT GGTTCCGGTG CACAGGCTGA CCTTGGGGGC GAACTACTCC 
TACCTGCGCA ACAAGATCGA TCAGCCGGTG TTCTTTACCG GGGTCTTTGT CCCTAGCCAG 
TCAGGTGCCA AGTACGTGAA CCGGGCCCAT GTCTATTCCC TCAACGCTGC GTATGCTGCG 
ACCGAAAAGC TCGACCTCTC GCTTTTGCTG CAGCAAATCG AGTCGACCTC GATCTTCAGC 
CCCGACCCTG CCGTCTTCAC AGTGGGCATA CCTGGGAGCA CCGCGGGGAT CGGCGAGTTG 
AGCACCTCGC GTGCCGTCCA ACGCACCGTT TCGGCGCGGG GGGAGTACCG CTTCAACCAG 
GTGTTGTCGA CCTCGCTTGA GTACACCTTC AGGGATTACG AAGACAAGAA AGCAGAAAAC 
AGCGCCTTCA ACGGCTCGGC TCATGCGATA GTAGCCGTGG TCGCGGCCAA GTGGTGA 

 

Protein sequence

MVNKPLDLVS AVISPLILLL LAAGSVCAAE GDIIEVPVAD ADLLEAPPEP EPQLLVDLNP 
LPAEYDRQVE VLEQKGGSLG YNWLFKDRNA GRALEYGFSE SSRSGGVFYR HMEKDSNLEL 
EGFYLNENDY HGDLILDYRG DYRLHLRTES LYHNLDREIL FSPSFQSGSN SGGLATYEPI 
QLDAGAKYGV SVVQDRADFR YRLHDFPMHL NLGYWRYQRE GSVQQIFSDA SFEGTVNRVF 
AQARPVNQQV QEGRLGFDAH LGLVDVIYDF KFRSFEDKLS TPVADYVARP DLAGNPLTLA 
GAQQHNENPD SRFYSHTIKL HSSMSGGLVT GASYSVEQRE NLSKLTDTVG VQHARTYLQN 
AAGDFVYTPD REYTFSIRYR RQEVEHGNRG AVLSSNLLLP AALSRPPVDT VKDLVIASVS 
YKPRLNLSLV GEYRGEFLQR KHVSLFPSES SWALPENTNT NTGSLAVHYR PIKGLRTSAH 
LSYATSDNPS YGESFGERRE GKLLANYTRS NVWGLTGHAL FRHDKNDEVP HYLVLLNRAN 
PDPVSYTAAP LSFRDKRSEN SNIGAWVVPV HRLTLGANYS YLRNKIDQPV FFTGVFVPSQ 
SGAKYVNRAH VYSLNAAYAA TEKLDLSLLL QQIESTSIFS PDPAVFTVGI PGSTAGIGEL 
STSRAVQRTV SARGEYRFNQ VLSTSLEYTF RDYEDKKAEN SAFNGSAHAI VAVVAAKW