Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3095 |
Symbol | |
ID | 6779954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3581624 |
End bp | 3582322 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642769092 |
Product | Pirin domain protein |
Protein accession | YP_002139893 |
Protein GI | 197119466 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000217046 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCACGA TCAGAAAATC TGAAGACAGA GGACATGCCG ATCACGGCTG GCTCAACACC TATCACAGCT TTTCCTTCGC CGGATACTAC GACCCGCGGC ACATGGGTTT CAGCAACCTC CGGGTCATAA ACGAAGACCG GGTGCAGCCG GGAGAGGGAT TCCCCACCCA CCCGCACCGG GACATGGAGA TCATCTCCTA CGTTCTCGAA GGGGCACTGG AGCATCGCGA CAGCATGGGA AACGGTTCCG TGATACGGCA GGGGGAAGTG CAAAGGATGA GCGCCGGCAC CGGCATCACC CACAGCGAGT TCAACCATTC CAAAGAAGAG GGCCTTCACT TCTTCCAGAT CTGGATTCTG CCGCAAAGCG AGGGGATCGC GCCGAGTTAC GAGCAGAAGC TCTTTCCGGA GCAGGAAAAA AGAGGAGCCT TGCGGCTCAT CGCCTCGGCA GACGGCGCCG AGGGTTCAAT CATCATCAAC CAGGACGCGA AGATGTACGC GACCGTTATC GATGGCGGTC AGGAAGTGGT GCACCACCTG GCGCGGGGGC GCCACGCGTG GGTTCAAGCG GCACGCGGCA GCGTCACCGT CAACGGCCAC CTGCTCGAAG CAGGAGACGG CGCGGCGGTA AGCGGTGAGG ACCTGGTGCG CCTGACGGCA AGGCAAAAAA GCGAGGTGCT GCTTTTCGAT CTGCCGTAA
|
Protein sequence | MITIRKSEDR GHADHGWLNT YHSFSFAGYY DPRHMGFSNL RVINEDRVQP GEGFPTHPHR DMEIISYVLE GALEHRDSMG NGSVIRQGEV QRMSAGTGIT HSEFNHSKEE GLHFFQIWIL PQSEGIAPSY EQKLFPEQEK RGALRLIASA DGAEGSIIIN QDAKMYATVI DGGQEVVHHL ARGRHAWVQA ARGSVTVNGH LLEAGDGAAV SGEDLVRLTA RQKSEVLLFD LP
|
| |