| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3060 |
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| Symbol | |
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| ID | 6779916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3546585 |
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| End bp | 3547979 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642769054 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_002139858 |
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| Protein GI | 197119431 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCATCC TGAGTAGTAG CGATACTGTT CCATTGTACA AGCAGCTCTA CAACCAGATC
AGGGACCTCA TACTGTCAGG CAAACTACCT GCCGATTCCA AGCTTCCGTC GGTGAGGCAT
CTGGCCAACG AACTCTCTGC CAGTTGCAAC ACGGTGGACG GCGCCTATCA GGAGCTTTAT
GCAGAGGGGT ACATTTACAG CAGGCCGCGC AGCGGGTATT TCGTGTCGGC ACTGGACCAG
GAGATGGCAC CACACGCTAC TACCTCGGCA AAGTTGGGCC GAAACGACTT CCTGCCGCCT
CCCCCAGCCC GCTTTGCCTA TAATTTCCAC CCTGCCCGCC TCGATCAGGA GAGCTTCCCC
GCGGCTCTCT GGCGTAAATG TCTGATCGAA GGTCTGCGCG GCAACAGTAA AGAGCTGAGC
CACTATGGCG ACCTCCAGGG CGATTGGCGA TTGCGCTGCT CCATTCAAAG TTACCTGGAA
AAATCACGTG GCGTCATGTG CGATCCCGAG CAGATTGTGG TCTCTTCTGG GCTCCACCAA
GGCCTCGAAA TCGTCGCGCA ACTGCTAAAA GACGACCACT CAGTGGTAGG GGTCGAGGAC
CCTGGCTATC ACCTTCCTCG TGCTGTCTTT GAAAACCATG CCTATACCAT TAGACCTGTC
CCCGTCGGAC AAAGTGGAAT CGAGCTCAAC CAACTCAAGG CTGGTGACGC GACTATCGTC
TACGTCACTC CGTCCCATCA GCTGCCACTG GGTTATGTGA TGCCGGTGGC CAATCGGCTG
GCATTGCTAG AGTGGGCCGA ATCCGGTGGC AATTTCATTA TCGAAGACGA CTACGACAGC
GAGCTTCGCT ACCAAGGTAA CCCGATCCCC TCCTTGCAGG GGATTCGTCC AACTGGAAAC
ATCATCTACT CTGGAACCTT CTCCAAGATC CTCTCCCCGG CACTCCGCCT GAGCTATCTG
GTTCTCCCTT ACTCTTTACT GGGTGCCTAC CGCCAGCGAT ACGGAAGCTA CAACTGTTCA
GTGTCACTCG TTGAGCAACG AGCCATGGCG TGTTTCATGG AGCAGGGGCA TTGGGAGCGA
CATATCCGGC GGATGCGCAC GGTCTACAAA AAGAAGCACG ACATCCTGCT GCGGTGCGTG
GAAGCCTCGT TTGGCAAACG GGCTGTGGTA ATCGGTCAGG GTGCCGGCCT GCATGTTGTC
ATAAGGTTGC ACGTGACGCC GCTCAGCGAA GCTGAGATCA TTGCTAAGGG CCGGCAAAAG
GGGATCGGGC TGGTCCGGTT TTCCGATTTC CACGCCACCG GCAATTGCGA AAACGTGACG
CTGATGCTCG GTTTCGGTGG ACTTACCGGT AATGAAATTG AGCAAGGCAT TACCTTACTC
TCCCAGATCT GTTGA
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| Protein sequence | MFILSSSDTV PLYKQLYNQI RDLILSGKLP ADSKLPSVRH LANELSASCN TVDGAYQELY
AEGYIYSRPR SGYFVSALDQ EMAPHATTSA KLGRNDFLPP PPARFAYNFH PARLDQESFP
AALWRKCLIE GLRGNSKELS HYGDLQGDWR LRCSIQSYLE KSRGVMCDPE QIVVSSGLHQ
GLEIVAQLLK DDHSVVGVED PGYHLPRAVF ENHAYTIRPV PVGQSGIELN QLKAGDATIV
YVTPSHQLPL GYVMPVANRL ALLEWAESGG NFIIEDDYDS ELRYQGNPIP SLQGIRPTGN
IIYSGTFSKI LSPALRLSYL VLPYSLLGAY RQRYGSYNCS VSLVEQRAMA CFMEQGHWER
HIRRMRTVYK KKHDILLRCV EASFGKRAVV IGQGAGLHVV IRLHVTPLSE AEIIAKGRQK
GIGLVRFSDF HATGNCENVT LMLGFGGLTG NEIEQGITLL SQIC
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