| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3035 |
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| Symbol | |
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| ID | 6779891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3500152 |
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| End bp | 3502203 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642769029 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_002139833 |
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| Protein GI | 197119406 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTACA CGCAGGAAAA TAAACTTATC TCTATAGTGA CTCCGCTGGG CCCTGACGTG
TTGTTACTGA CGGCATTTAG CGGAGCAGAA AGCATCTCGA AGATGTTCAA CTTCGAGCTC
TCGATGGTCT CTGAAAACCA TGGAGTTTCT TTCGATGGGA TCATCGGCAA AGGCGTGACC
GTTACCATCC AATTGGCAGA CGGCGGCAAG CGTTACCTCA ACGGAATCAT CTCCAGCTTC
TCGCAAGGCA GAGGCGGAGG AGGAGAGGGG ACCGACGCGA GGTTCAGCTA CTACCGCGCC
ACCATAGTCC CTTGGTTATG GGTGCTGACC AAAAGGTCCG ACTGCAGGAT TTTTCAAAAC
CAGTCGGCGG TTGAGATCGT GCAGGAAGTA TTCAAAGGCC ACGGTTTCAG CAACTTCCGC
CTTGAGCTTC GTTCCAGTTA CACCCCCCGT GAATTCTGCG TCCAATACCG TGAAACCGAC
TACAATTTCG TCTCGCGCCT GCTTGAGGAG GAAGGCATCT TTTACTTCTT CGTGCACGAG
GCCGGCAAGC ACACGCTGGT ACTTGCCGAC ACTCCCGGAG CACATAAGCC ATGCCCCGGG
CAAAATACCG CGTCCTGCCA ACTAAGCGCC AGTGCCGTCA GGGATAAGGA TGTGATCACC
TCGTTTGAAA TCACCAGGCA ACTCGGCGCC TCCAAGTACA TCATCAACGA CTTCAACTTC
AAAGTACCGA AAGCAGGTCT CGCTGTCGAA GTGAAGGGGA CGGACAAACG ACAGGTCGGG
AATCGCGAGA TCTATGAACA GCCGGGAGGC TATGACAACA AAGCGGCCGG CGATTCATTG
GCGAAAGTGC GTATGGAAGA AGATGAAGCG CATTCTATAG AGATCGCCGG TACTAGTGAC
TGCCGCAGTT TTACCTCCGG TTTCCGGTTC ACCCTCAAAG AGCATCCTCG CAAAGATCTG
AACGCACAAG ATTACCTACT GGTGTCGTTG CAACATCAGG CAACCGAAGG GTACGGAGAT
GCCGGCGGGG CTTCCTACGA GAACAGCTTC AATTGCCTGC CTTACAATGT CCCCTACCGC
CCGCGTCGCC ATTCACCCAA GCCTGTCATC CATGGCACCC AGACCGCAAT CGTTGTCGGG
CCGCCAGGAG AAGAGATCTA CACCGACGAA TACGGCAGAG TCAAGGTGCA GTTCCACTGG
GACCGAGCTG GGAAAAGCGA CGACAAAAGT TCCTGCTGGA TCAGGGTGAG CCAGACCTGG
ACAGGGAACG GTTGGGGAGC GCTCCAGGTA CCTCGCGTAG GTCAAGAGGT TGTGGTGGAT
TTTCTGGAAG GGGATCCCGA CCGCCCCATC ATAGTCGGGC AGCTCTACAA CGGGGTGAAC
CTGCCGCCGT ACTCCCTGCC TGCGCACAAA ACAAAAAGCT GCACCAAATC GCACTCCTCC
CCCAAGGGTG AGGGCTTCAA CGAAATCCGG TTCGAGGACA AAAAAGGTGA GGAGCAGCTC
TTCATTCACG CGGAAAAGCA GCAGGACAAC CGGGTAAAAG GTGACTCCCT GGAATGGGTG
GGGGAGGATC GTCATCTGAT CGTAGTGAGG GACCAGTACC GGCAGGTTTC AGGAGACCAG
CATTTCACTG TGGCAGGAGA CCGCAACGAG AAAGTGACGG GAACAGTATC AATCACCGTC
GGCGCAGACC TGCAGCAAAA GATCGGCGGA AAACATGCGC TGGCCGCAGG AGAGGAGATC
CATCTCAAAG CCGGGACGAG ACTTATCGTT GAGTCAGGGA CCAGGATCTC TCTCAAGGTC
GGCGGCAGTT TCATCGACAT CGGCCCGGCC GGTGTGAGCA TAGTCGGGCC CTCAGTCCTC
ATCAACCAGG GGGGGACAGC CGGGTTCGGT TCCGGAGCAA GTCCCGACCT GCCGCGGCCG
CCGAAAGAGG CGGACAGATC CGTTGCCGCA AAAGCTGAAG GGACCATGCG CGGCAAACCG
CCAGAAGTAG GCGCCCAGGC GGCATCACTT AGATCGGCAG CAGGAGACCA CAAGATGTTT
TGCAATGTCT GA
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| Protein sequence | MAYTQENKLI SIVTPLGPDV LLLTAFSGAE SISKMFNFEL SMVSENHGVS FDGIIGKGVT
VTIQLADGGK RYLNGIISSF SQGRGGGGEG TDARFSYYRA TIVPWLWVLT KRSDCRIFQN
QSAVEIVQEV FKGHGFSNFR LELRSSYTPR EFCVQYRETD YNFVSRLLEE EGIFYFFVHE
AGKHTLVLAD TPGAHKPCPG QNTASCQLSA SAVRDKDVIT SFEITRQLGA SKYIINDFNF
KVPKAGLAVE VKGTDKRQVG NREIYEQPGG YDNKAAGDSL AKVRMEEDEA HSIEIAGTSD
CRSFTSGFRF TLKEHPRKDL NAQDYLLVSL QHQATEGYGD AGGASYENSF NCLPYNVPYR
PRRHSPKPVI HGTQTAIVVG PPGEEIYTDE YGRVKVQFHW DRAGKSDDKS SCWIRVSQTW
TGNGWGALQV PRVGQEVVVD FLEGDPDRPI IVGQLYNGVN LPPYSLPAHK TKSCTKSHSS
PKGEGFNEIR FEDKKGEEQL FIHAEKQQDN RVKGDSLEWV GEDRHLIVVR DQYRQVSGDQ
HFTVAGDRNE KVTGTVSITV GADLQQKIGG KHALAAGEEI HLKAGTRLIV ESGTRISLKV
GGSFIDIGPA GVSIVGPSVL INQGGTAGFG SGASPDLPRP PKEADRSVAA KAEGTMRGKP
PEVGAQAASL RSAAGDHKMF CNV
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