Gene Gbem_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2980 
Symbol 
ID6779834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3448073 
End bp3448984 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID642768975 
Productputative formyltransferase 
Protein accessionYP_002139779 
Protein GI197119352 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATA AGGTCGTAGT TTGCGCCTAC CACAACGTGG GCTACCGCTG CCTGGAGGAA 
CTGATCCGCC AGGGGGCCGA CGTCCGCCTC GTCTTCAGCC ACGAGGACTC GGCGAGCGAG
GAGATCTGGT TCCGCTCGGT ACGCGAACTG GCCGCCCGCC ACGGCATCCC TTGCCTGACC
GGCAACGTCA ACGATGCCGA AAACCGCGAG AGGATTGCCG AACTTGCCCC GGACTTCCTC
CTCTCTTTCT ACTACCGCAA CATGATTTCG CCCGAGGTGC TGACCCTGGC GAGACGCGGC
GCCCTCAACC TGCACGGCTC CTACCTCCCG CGGTACCGCG GACGCGTCCC GATCAACTGG
GCGGTGATCA ACGGCGAAAC AAGCACCGGG GCAACCCTGC ACTACATGGT GGAGAAACCG
GATGCCGGCG AGATCGTCGA CCAGGAAGCG GTGGAAATCG CCTTTAAGGA CACGGCGTTC
GACGTCTTCA ACAAGGTGAC CGACGCCGCC GTGACCGTGC TGCGCCGCGC CTGGCCGCAA
CTGGTCGCCG GAACCGCACC GCGCATCCCG ATGGACCTCA AGGCCGGCAA CTACTGCGGC
GGCCGCAAAC CAGAGGACGG CCGCATCGAC TGGAACCTGA GCGCGCGCCG GATCTACGAT
TTGGTGCGCG GCGTCACCCA CCCCTACCCA GGCGCCTTCA CAACCCTTGC CGGCCAAAAA
CTGCTTGTAT GGCAGGCCTT TCCTGTCGAG GGAGCGGGAG AGCCGGGACG CGTGGTCTCC
ACCCGGCCGC TGCTAGTCGG CACAGGGGAG GGGCTACTGG AGATCCGAAG CCTGCAGCTT
GAAGGGGATA CGGAACTCTC AGCTTCCGAT TTCGTGGAAA AGACCTCCTG CAACGGCGAA
CTCCTCGCCT GA
 
Protein sequence
MKDKVVVCAY HNVGYRCLEE LIRQGADVRL VFSHEDSASE EIWFRSVREL AARHGIPCLT 
GNVNDAENRE RIAELAPDFL LSFYYRNMIS PEVLTLARRG ALNLHGSYLP RYRGRVPINW
AVINGETSTG ATLHYMVEKP DAGEIVDQEA VEIAFKDTAF DVFNKVTDAA VTVLRRAWPQ
LVAGTAPRIP MDLKAGNYCG GRKPEDGRID WNLSARRIYD LVRGVTHPYP GAFTTLAGQK
LLVWQAFPVE GAGEPGRVVS TRPLLVGTGE GLLEIRSLQL EGDTELSASD FVEKTSCNGE
LLA