| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2877 |
|---|
| Symbol | |
|---|
| ID | 6779729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3314714 |
|---|
| End bp | 3315571 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642768871 |
|---|
| Product | NmrA family protein |
|---|
| Protein accession | YP_002139677 |
|---|
| Protein GI | 197119250 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTCG TCACTGGAGC CACCGGACAG TTAGGGCGCC TCGTCATCGC ATCGCTTCTC
AAAAAAGTAC CAGCCTCCCG CATCGTCGCC GCGGTACGGA ACCCCGACAA GGCCAAAGAC
CTTGCCAACC TCGGCGTCCA GGTTCGCCGG GCCGACTACG ACCTGCCCGA GAGTTGGGAA
AGCGCACTCG TCGACGCCGA GAAGGTGCTA CTGATCTCTT CCAGCGAGGT TGGCAAGCGC
ATCGGCCAGC ACCGCACCGT CATCGATGCG GCCAGAAGGG CCGGCGTGAA ACTTCTCGCG
TACACCAGCC TGCTGCGGGC CGATAGCTCC CCCCTCGGAC TCGCCGCCGA GCACGTCGCC
ACCGAAACCA TGATCCGCGA CTCCGGTATC TCATTCGTCA TGCTACGTAA CGGCTGGTAC
ACCGAGAACT ACGCCGCCAG TATCGCTCCG GCGGTCGAGC ATGGGACCTT CTACGGCTCC
GCCGGCGACG GCCGGATCGC GTCGGCCGCC CGCGCCGACT ACGCAGAGGC CGCCGTTGCC
GTGCTCACCA CTGAAGCGGA GGGGGGACGG GTCTACGAAC TGGCCGGTGA CACAGCCTAC
ACACTCAACG AATTCGCCGC CGAGATTTCC CGCCAGTACG GCAAGCCGGT CAACTACGTC
AACCTCCCCG AGCTCGAGTA CAAGAAGCTG CTCGTTTCCG TTGGGCTTCC TGAGCCGTTC
GCAGCTCTCC TGGCCGATTC CGACAGCGGC GCCGCAAAAG GGGGACTCTT CGACGATAGC
CGTCAACTGA GCACCCTGAT CGGCAGGCCG ACCACCGCCC TGGAGGCGGT GATAGCCCAA
GGCAAAAAAG GCGCGTGA
|
|---|
| Protein sequence | MIVVTGATGQ LGRLVIASLL KKVPASRIVA AVRNPDKAKD LANLGVQVRR ADYDLPESWE
SALVDAEKVL LISSSEVGKR IGQHRTVIDA ARRAGVKLLA YTSLLRADSS PLGLAAEHVA
TETMIRDSGI SFVMLRNGWY TENYAASIAP AVEHGTFYGS AGDGRIASAA RADYAEAAVA
VLTTEAEGGR VYELAGDTAY TLNEFAAEIS RQYGKPVNYV NLPELEYKKL LVSVGLPEPF
AALLADSDSG AAKGGLFDDS RQLSTLIGRP TTALEAVIAQ GKKGA
|
|---|
| |