| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2826 |
|---|
| Symbol | |
|---|
| ID | 6779678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3251928 |
|---|
| End bp | 3253085 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642768820 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002139626 |
|---|
| Protein GI | 197119199 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTGG AACTAAACGA AGAGCAGAAG CTGATTCAGG AGACTGCGCG CGAATTCGCC
AAGGCGCAGT TGGAGCCGCT GGCGGCGAGG CTTGACCGGG AGGATGACCG CCCCGCTTTC
CTCGCCAACT TGAAGAAGCT GGCGGAATTA GGCTTCATGG GGCTGAACGT CTCCGCCGAG
TACGGAGGAT CGGAAGCGGG AGTGGTCGCC TTCAGCGTCG CCATGACCGA GATCGCCCGG
GCCTGCGCCT CCACGGCGGT CACCGTGTCC GTCAACAACA TGGTCTGCGA GGTGATCCAG
GCGATCGGCT CGGCCGAGCA AAAAAAGAAG TACATCCCGC GCATCTGTTC GGGAGAGTAC
GCCGCCGGTG CCTTCGCCCT GACCGAGACC GGTGCTGGTT CCGATCCGGC CGGCATGACT
ACCTCCGCGG TAGCGGAGGG GGACCAGTGG GTGCTGAACG GCTCCAAGAT CTTCATCACC
AGCGCCCCGT ACGCCGGTGT CTTCGTGGTC TGGGCCGTCA CCGATAAGGA CGCTCCCAAA
GGGAAAGGAA TCAGCTGTTT CCTGGTGGAG CAGGGCGCGC CCGGGCTGGT GATAGGGAAG
CAGGAAGAGA AGACCGGCCA GCACGCCTCC GCCACCTGCG AGGTGCTCTT TGACAACTGC
AGGATTCCCA AGGACGCCCT GATGGGGAAG CTGAACGACG GTTTCCGCAT AGCGGTCGGC
GAGTTGGCCG GCGGGAGGAT CGGCATCGGT TCCCTTGGGC TGGGAGTGGG ACTTGCGGCG
ATGGACTTCG CCACCAGGTA CGCCAGCGAG AGGGTGCAGT TCGGGCAGAA GATCACCAAT
TTCCAGGCCA TCCAGTGGAT GGTAGCCGAG GCCTACACGG AGCTTGAGGC CGCGCGCCTG
TTGCTGATGC AGGCCGCCTA CCGCAAGGAT GCCGGCAAGT CCTTTGCCAA GGAAGCCTCC
ATGGCCAAGA TGTACGCCAC CGAGGCGGCG AACCGGGCCT GCTACAGCGC GGTCCAGATG
CTGGGGGGGT ACGGCTACAC CCGCGACTTC CCCGTCGAAC GCTATGCCCG CGACGCCCGC
ATCACCGCTA TTTACGAGGG TACCAACGAG ATTCAGCGGG TGATCATAGC CAGGGAGATA
TTGCGCAACT TCAATTGA
|
|---|
| Protein sequence | MFLELNEEQK LIQETAREFA KAQLEPLAAR LDREDDRPAF LANLKKLAEL GFMGLNVSAE
YGGSEAGVVA FSVAMTEIAR ACASTAVTVS VNNMVCEVIQ AIGSAEQKKK YIPRICSGEY
AAGAFALTET GAGSDPAGMT TSAVAEGDQW VLNGSKIFIT SAPYAGVFVV WAVTDKDAPK
GKGISCFLVE QGAPGLVIGK QEEKTGQHAS ATCEVLFDNC RIPKDALMGK LNDGFRIAVG
ELAGGRIGIG SLGLGVGLAA MDFATRYASE RVQFGQKITN FQAIQWMVAE AYTELEAARL
LLMQAAYRKD AGKSFAKEAS MAKMYATEAA NRACYSAVQM LGGYGYTRDF PVERYARDAR
ITAIYEGTNE IQRVIIAREI LRNFN
|
|---|
| |