| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2821 |
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| Symbol | |
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| ID | 6782820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3247293 |
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| End bp | 3248864 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642768815 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002139621 |
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| Protein GI | 197119194 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCGCG TCGGAATACG CAGACTTTTC AGCTGGATAG GGGGGCTCTC CCCCGCCGCC
ATCAGCTCCA TCTTCGCCTT CAGCAGCCTC TCTTGGCTTC TTCTTGCCCA CCTTCTCTTC
CGTAGCATAT TTGTAGACCG CGAACTCACC TACCTCGCCC TTAGCATCCT CGAGCTTTTC
GGGGTCGCCA CCATGACCGT CATCGTCTAT CTGCTCAGCG ACAAGAGCGA AGCAAGGCAT
CGGGCCATCG AGTCGAGCAT CCGCGAGCAG GCCATACGCG ACGGGCTCAC CGGGCTCTAC
AACCGGCAGG CTTTCGACGA TTTCCTGGCG CAGTCCATCG AATACGTCAA ACGCCGCAGG
GAGTCTGTCG CCCTGTTGTT TCTCGACCTG GACCGGTTCA AATTCGTCAA CGACAGGCGT
GGGCATTTCG TGGGAGACGC GGTCCTAATC GAGACAGCGC GACGGCTCAC CGACTGCGCC
AAACGCGGAG AAGACCTGGT GGCCCGGGTG GGGGGGGACG AGTTCGCCAT GCTGCTGCGC
CACCCCGATA TGCCGGACGG GCCGGGGGTT GTCGCCAGGC GTGTGCTGGA GTCGTTGTCG
GCGCCGGTGC AGGTGGATGG CGAGACGCTG AAGACCAGCG TCAGCATCGG CATCGCCATG
TTTCCTTCCG ACGCTGACGA TCCCATGCAG CTCTTCAAGA TGGCCGATTT CGCCCTGAAC
CAGGCGAAGC AGCAGGGACG CGCGACCTTC TGCTTCTATG GCGGCGAATG GCGGGAAGAG
CGCGACCATA CCCTGCAGTT GGAACAGGGG CTCTTGCGTG CCATCAACTA CGACGAGTTG
TTCCTGGTTT ACCAGCCCAA GCTGGATACC TCCAACATGC GCGTCATCGG AGTTGAGGCA
CTGGTGCGCT GGAAGCACCC GCACTTGGGA GTGCTCGGGC CGGCGAGCTT CGTCCCCGTG
GCCGAGAAGG CTGGCCTCAT CTGGCCGCTG ACCGAGTGGG TGCTGAAGAA TGCCTGTTCC
CAGGCGGCGC GCTGGTACCG CAACGAGGGG CTGGACCTGA ACGTCGCCGT CAACCTCTCC
CCTTCCGTTT TCTCGCATCA GGACCTGGAA GAGGTGATCG AGAAGGCGCT GAACGACAGC
AAACTCCCCC CGGACCGGCT CACGCTCGAG ATCACGGAGC AGTCGCTGAT GATCTACGAG
ACGGAGGCGC TCGGGGTGCT GGAGCGCCTG CAGCGGATGG GAACCAACAT CCAGATAGAC
GACTTCGGCA CCGGCTACTC GTCCCTCTCT TCTCTCAAGC ACTACCACTT CCAGGCGCTC
AAGATAGACA AGTCCTTCGT CAGCGACGTC GTCACCTCTT CGGACGACGC CGCCATCGCC
ACCACCATCA TGTTCATGTC CAAATGCCTT GACATGGAGG CCATCGCAGA AGGGGTGGAA
TCCGAGGCGC AAAAGGAATT CCTCTCCTCC ATCGACTGCC GCTACATGCA GGGTTTCTAT
TTCTCCCGCC CCCTCGTCGC CTCTGAAATG GCCGATTTCA TCAGGCATCT CGCCGACGAC
AAGAAAGCTT GA
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| Protein sequence | MGRVGIRRLF SWIGGLSPAA ISSIFAFSSL SWLLLAHLLF RSIFVDRELT YLALSILELF
GVATMTVIVY LLSDKSEARH RAIESSIREQ AIRDGLTGLY NRQAFDDFLA QSIEYVKRRR
ESVALLFLDL DRFKFVNDRR GHFVGDAVLI ETARRLTDCA KRGEDLVARV GGDEFAMLLR
HPDMPDGPGV VARRVLESLS APVQVDGETL KTSVSIGIAM FPSDADDPMQ LFKMADFALN
QAKQQGRATF CFYGGEWREE RDHTLQLEQG LLRAINYDEL FLVYQPKLDT SNMRVIGVEA
LVRWKHPHLG VLGPASFVPV AEKAGLIWPL TEWVLKNACS QAARWYRNEG LDLNVAVNLS
PSVFSHQDLE EVIEKALNDS KLPPDRLTLE ITEQSLMIYE TEALGVLERL QRMGTNIQID
DFGTGYSSLS SLKHYHFQAL KIDKSFVSDV VTSSDDAAIA TTIMFMSKCL DMEAIAEGVE
SEAQKEFLSS IDCRYMQGFY FSRPLVASEM ADFIRHLADD KKA
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