| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2718 |
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| Symbol | |
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| ID | 6782716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3137981 |
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| End bp | 3143983 |
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| Gene Length | 6003 bp |
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| Protein Length | 2000 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642768711 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_002139518 |
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| Protein GI | 197119091 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATCG CTGCAGGCAA GAAGAGGAGG AGGTGGGGGG GGCTGCGCCT GATCGCGCTC
GCGCTCCTGC TTGCCCTTCC CGGTACTGCA TTTTCGCTCA CCCCGGCAGG GACCGTCATC
AGGCACGATT TCTCAGCACG CTTCGCCACC CCAGGTCTTC GGGAAGTCCG CTCCAACGAG
ACCCAAGTGA GCGTGAAGGA CCTTTCCGAC CCGGCGCTGG TTCCCCCGCG TACCGCCACC
ACCAACGCCA ACGTTCCTGT CGATTTCCGT CACACCCTCA CCAACCGGGG GAACTTCCCC
GACAGTTTCA GGTTGAAAGC CGCGGCGGTC GACGCGGCGC TGCCGGAGAA CGGGCAGGCG
CCGCTGCTCC GCTTTTACGC CGCTGACGGC GTGACCCCGT TTCCCCACGA TGCCGGCGGC
TTGCAGGTGG TAGGCCCCCT TGAACCCGGC GCTTCCGTCG AGCTGGTATT GAGGGCAACG
CCGCCGGCCG GAAGCGAGGG ACGGGTGGCG TTGATCGCGG TCAGCGCCAC CTCCGTGCTG
GTGCCGGCGC GAAGCGCGAG CCTGACCAAC CAGCTACAGG TGCCGGCCGG AGGTGTTTCC
TTCTTCAAGG CCGTTTCACC GGTGGGGAGC GTACTTCCCG GGACCGTCCT GACCTACAGC
ATCTCGCTTG GGAACAGCGG GGGAACGCCC GTGGCCGGTG TGCGGGTGGT CGACCCTTTG
GATCCCCTTC TCGAATACCA GCCGGGAAGT GCGGCGCTTC CTGCCGGAGT TCCCGGAACC
GTCAGTTTCG ACGCCGCAAC CCGGACGCTC GTCTTCGACA TATCGTCGCT CCCCGCCGGA
TTCAGCGGGG AAATCACCTT CCAGGCCCGC GTACGCGATG ACGCCCCGGG AAATGCCTCC
ATTGTCAACA CCGCCGGCGT CTCCACTGCG GGAAATGCGG CACCCTTCCT CAGCAACAGC
ACCCTCAACA CCGTGCTGGT CAGATTGCTC CAGGTAACCA AGACTGCGGG AAGCAGCTCA
GCTGAGGCCG GCGACATAGT GTCATACGCG GTGCGGGTGC AGAACATCGG CGACGGCGTC
TTGGACCATG TGACGGTAGC CGACCGTATT CCCCGCGGCT TCCGCTATCT GAAGGGGTCG
AGCCACGTGG ACGGGTTCGC CGTGGCGGAC CCGGTGGGAG GGGGGCAGCA GTTGAGTTGG
GACTTGGGGA GTTTCGAGCA CGGAGCCTTC AAGGTGCTCA ACTACCGGTT GGTCGTTTCC
GCCGACGCCC CCGTCGGGAC CGCCGTCAAC TGGGCCCGGG CCACCGGAAC CCCTGCCAGC
GGCGGCAGCG TCGTCTCCCC TCCCGCCAGT GCCGCCGTTA AGGTAAGGGG CTCCGTACTC
GGGAGCAAGG CCATCATCAT GGGGAGGGTC TTCCATGACG GCAACGGGAA CGGCGTGCCG
GACCGAGGGG AGCGGGGCGA GGCCGGGGTG CGGGTTTACC TGGAAGACGG TTCCTTCGTC
TTCACCGACG TCGAAGGGCA GTACAGTTTC ACCGGGGTTT CCGCGGGCGA CCACGTCGTG
AAGCTTGACC GGTCCACCCT CAACCCGGGT TTTGTGTCCG TGCCGTACAA CACTGCCTTT
GCCGGGGTGG GGTGTTCGCA GTTCATCACC GTACCCTTCG GCGGTCCGGC GCGCGGCGAC
TTCGCGCTCG CCGCGAACCC GGCAGGTCCG GCAGGTCCGA CAGGTCCGAC AGGTCCGACA
GGTCCGACAG GTCCGACAGG TCCGACAGGT CCGACAGGTC CGACAAGTCC GACAAGTCCG
ACAAGTCCGA CAAGTCCGAC AAGTCCGACA AGTCCGACGC AGTCGGCGCC TCCGGCTACC
GAACCGGCTG CCGCGTCCCG GCTTCGGCTC ACCCCCGACC GCGTCGAGCT TCCGGCGGAC
GCCAAAACCT CCGTCCCCTT CAAGGTCGAA CTCCTCGACT CCGCCGGCAG GCGGGTCCCC
GGTTCGACAA CCGTCACCCT CTTCCTCGCC AAGGGAACCA TCTTGGAGTC GGACCTGGAC
CCGGCCCTCC CGGGCCACCA GGTCCGCATC ACCGACGGCC TGGGCGTCTT CCAGGTGCGC
TCCGGCCGCG CCACCGGGGA CGACCTCCTC ATCGCCAAAG ACGGCGACGG CAGCGCCGCC
CAGGCGGCCC TCTTCTTCAG TCCGGACCGG CGCGACTGGA TCCTGGTCGG CTTAGGCTCC
CTCACCGTGG GTGGAAAGGC GGTGAGCGGC AACCTGGAAA AGATCGACAA GGACGACCGC
TTCGACGAGG GTATCTTCCA CGAGGAACGG CTCGCCTTCT TCACCCGCGG GAAGATCCTC
GGCAAGTACC TCCTGACCGC CGCCTACGAT TCGGACAAGG AACGCCGCGA CGGCGTGTTC
CAGGCCATCG ACCCGGAGAA GTACTACCCG GTCTACGGCG ACGCCACCGA CATAGGGTAC
GAGGCGGAGT CGCGCGGCAA GATCTACCTC AAGCTGGAAA GCGGCCGCTC CTACCTCATG
GCCGGCGACT ACCGCACCGA CCTCTCCGAA AACGAATTCT CCCGCTACGA CAGGGCGCTC
AACGGCGCCA AATTCGAGGT CAACACCAAG TCGGTTACCG TCAAAGGGTT CGAAAGCCGC
ACCGAGGAAA CGGTGACCCG GGACGATATC CCCGGCAACG GCACCTCCGG CCACTACTTC
CTCTCCAGGC GGGACGTCTT CGAGAACAGC GAACGGGTGC GCATCGAGGT GCGCGACCGC
TACCACACCG AACGGGTCAT CGCCGTAACC GAGAAGGTCC GCTACGCCGA CTATTCCATC
GATTACCAGG CCGGGACCAT CCTCTTCAAG GAGCCGGTCC CCTCCCTGGA CCAATTCCTG
AACCCGGTCA CCATCGTGGT CAACTACCAG GCCACAGGCC CCGGGGAGGA GCGCTACGTC
TACGGCGGAC GCGCCGAGAT CCGGTCCGAA AACGGCTCGC ATATCGGGGG CACCGCCGTG
GTGGAGGAGC AGGCGCGGCA GGACAACACC CTCTTCGGCC TGGACGCCGC TTGGCGCCTG
GGCGAGCGCC TGACCCTGAA GGGGGAGGGG GCGGTCAGCG AGAACCTGGA GCATGGCAGG
GGAAGCGCCT GGAAAACGGA GCTCGCCGCG CGTCCCGTCG ATCCCCTCCT TCTGAACCTT
TACTACCGGA AGGTGGAGTC CGACTTCTTC AACACCTCGA TGACCGGGAC GGAGCTTGGG
ACCGAGAAGT ACGGCGGCCG GGCCGACTAC CGTGTCGGCG CCGACACCCT CGTCTTCGCC
GAGAGCTTCC TGCACCGCTT TGAATTGGGG GACCGGAAAC TCTTCGCGAA CCACGCGGGG
ATGGTGAAGA AATTCTCCCT GCTGCATTTG GAGGGGGGCG TCAAGGTGGT GCGGGAGGAG
CGGGACGGAC GGACCGAGGA ATCGGACCTG GTCTATGCCG GCGTCTTCGC GCCCCTCACC
AAAAAGCTCG ATGCGACCCT CAGGCGCGAG CAGCTTCTAT CCGCCTCCGG CGTCGCCGAC
TACCAGACAA AGACCTTCGC CAAGCTCGAC TACCGGCTCA CTGAGCGCAC CAAGGCCTTC
CTCACCGAGG AGTACCAAGA GGGCTCCCCC CTCATCCGCC AGGCCACCCT GTTCGGCCTG
GAGAGCAGGC TCTCGGACCG GATGCGGCTC ACCACCGGCT ACCAGATGTC CTCCGGCGCC
TCCGGTTACT CCCAGCAGAG CAACGTCGAC CTCAACACGC GGCTCATGGA GCGGGAAGGG
TTCAGCCTCG ATTCCAGAAC CGGCTACCAG ATCGAGCACG CCCTGTCGCA GCAAAGGGGG
CAGGCCATCG TCGGGCTGAA CAGCCGTTAC CGCGCCGCCG AGGGGCTCTA CCTCAACTCC
TCCCTGGAGC GGGTGCAGAC GGTGCAGGGA AATACCGGCA CCCGCACCGC CTTTACCTTG
GGGGGCGAAT ACCTCCGGGC CAGGGATCTG AAGCTCTCCG GCCGCTACGA GGTGAGGACC
GGCCCGGGGG AGACCGCCTC TCTCTACGGC GCCAACGCCG CCTACAAGAT GAGCCCCTCG
CTCACCCTCT TGGGGAAGCT CTCGCTCTGG GATCGGGACG CCGACGCCGG CGACGACGTC
ATCTTCGACG GCTACCTGGG GAGCGCCTTC CGTCCGCTGG CGGGCCAGCC GCTGCAGCTC
CTCACCCTGG CGCGCTACAA GGTCGAGGAC AGACGCTCGC TCCCCGGCTC CTTCGAAAGC
CGCAGCGTCA TCCTCTCGGC CGAGCCGACC TACAGGATCG TGAGCCGTTG GAGCGCCCAG
GGAAAATACG CCGGGAAGCT CAGCTGGGCC GACGGGGTGG GGGGGATGAT GCAGAGCTAC
ACCGACCTGG TCCTGGCCGG GCTCTCCTAC GACCTGGCGG AGCGCTGGGA GATCGCGGCC
TACCTGAAGC TCATGAACCA GTACGACGCC CGCATGCACT CGCTGGGTGC GGTGGGAAGC
GCCGGCTACC GCGTCTATAG AAACGTGGTC CTTTCCGCCG GCTACAACTT CGCCAGGCTC
GACGACCGGG ACTTGACCGG CGAGACCTTC CAGGGGCAGG GCCCCTTTGT CGGCATCAAG
GTCAAGTTCG ATGAGGACAT GTTCGAGTCG CGGCAGGCGA AGGTGATCCC CATCCCGGTT
CCGCCCCCCG CCCAGGTCGC CAAGGTTCCC CCCCCCGCGG CTCTAGTGCC GGCGCTCCTG
GTTCGGGCGG AGCGGCTGGA CGAGCCGCTG CTTCTCTCCG GGAGCGCGGA ACTATTCACC
CTCCTGGTCA ACGGCGAACG GGCGAAGCTT CCTTCCACCG AGGTGACGCT GACCCGGGAG
CACCTGGGTT CCCTGGAGCT CAAGGGGGGA AGGTTCCCTG CGCCGCTGGT CTTCCTGGTG
AGCGTGGAGC AGCCGGAACA GGTCGGTTCC TGGACGCTCA AGGTGATGAA TCGCGAGGGG
GAGGCGCTGC GCACGCTTGA GGGGACCGGG GCGCCGGCAA AGCGCATCCC CTGGCTTGGC
GACACGGACC GCCGGAAGGT GGAACAGGGC GAGATCTATC AGTACCAACT GCAGGTCACC
TACCTGGACG GCTCGATCTT CAGCACCGGC CGCGAACTCT TCGGCGTCAA CCGTCGCGAG
GCGGTACTCC TCACCCTGTC CGGCGGCGCT TTCGTCTTCG ACCGCTCCGA GCTGACCCTG
GAGGCCAAGC ACCTGCTCAA AGGGGCGGCG CGGGTCTTGC GGGCGCGCCC GCAGGAAAAG
GTGATCGTGG AGGGGCATAC CGACGGCATC GGGAGCGTGG AATACAACAT GGCGCTCTCC
CAGAGACGGT GCGACGCCGC CGCCGACTAC CTGGTACGGG AGGAAGGGAT AGCCGGCTCG
CGGCTGTTGC GGCGCTGGTA CGGAAAATCC CGCCCCGTGG CCGACAACGT CACCACCCCC
GGCAGGAGGC TAAACCGCCG CGTCGAGCTG AAGGGGGATT TCAAAGAGCT GCATCCGGTC
TCTCCCGATG ACCGGTACCG GACGAAATCC TTCGTGGTGA TCAACGGCCG CAGCATCCCG
GTGGATCCCC TGGGTCGCTT CGACACCACC TTCCCGGGCA ACACCCTCGA TCTCGACCTG
GAGATGGGGG ACTCGCAGGG GCGTTTCCTC GCCACTTCGC TCCCGCTTCC CGACCTGGCC
GTGACCGGGC CGCCGGCCGA GACGCTGGTC GGCTACGGCA CCGAAGCCTC CGGCGTCAGG
GTCGATGCCG ACGGCAAGGG GCACTGCATG CTTTCGGGAA CGGTCGAGGG GACCTCCATG
GAGCTCGCGG GGAGGAAGGT GCCGCTCGAC GAGGCAGGGC GCTTCACCCT CGATCTCCCG
CTTGCCGAGG GGGACCAGGT CCTGGGCGTG GTGCTCAGAA ACGGCTCCGG CTGCTCTAAG
CTCATGAACC TGCGGCTCCG TTCGGAGCGC CAAACCATGC CTGCCGCGCG GGGTGAGCGG
TGA
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| Protein sequence | MAIAAGKKRR RWGGLRLIAL ALLLALPGTA FSLTPAGTVI RHDFSARFAT PGLREVRSNE
TQVSVKDLSD PALVPPRTAT TNANVPVDFR HTLTNRGNFP DSFRLKAAAV DAALPENGQA
PLLRFYAADG VTPFPHDAGG LQVVGPLEPG ASVELVLRAT PPAGSEGRVA LIAVSATSVL
VPARSASLTN QLQVPAGGVS FFKAVSPVGS VLPGTVLTYS ISLGNSGGTP VAGVRVVDPL
DPLLEYQPGS AALPAGVPGT VSFDAATRTL VFDISSLPAG FSGEITFQAR VRDDAPGNAS
IVNTAGVSTA GNAAPFLSNS TLNTVLVRLL QVTKTAGSSS AEAGDIVSYA VRVQNIGDGV
LDHVTVADRI PRGFRYLKGS SHVDGFAVAD PVGGGQQLSW DLGSFEHGAF KVLNYRLVVS
ADAPVGTAVN WARATGTPAS GGSVVSPPAS AAVKVRGSVL GSKAIIMGRV FHDGNGNGVP
DRGERGEAGV RVYLEDGSFV FTDVEGQYSF TGVSAGDHVV KLDRSTLNPG FVSVPYNTAF
AGVGCSQFIT VPFGGPARGD FALAANPAGP AGPTGPTGPT GPTGPTGPTG PTGPTSPTSP
TSPTSPTSPT SPTQSAPPAT EPAAASRLRL TPDRVELPAD AKTSVPFKVE LLDSAGRRVP
GSTTVTLFLA KGTILESDLD PALPGHQVRI TDGLGVFQVR SGRATGDDLL IAKDGDGSAA
QAALFFSPDR RDWILVGLGS LTVGGKAVSG NLEKIDKDDR FDEGIFHEER LAFFTRGKIL
GKYLLTAAYD SDKERRDGVF QAIDPEKYYP VYGDATDIGY EAESRGKIYL KLESGRSYLM
AGDYRTDLSE NEFSRYDRAL NGAKFEVNTK SVTVKGFESR TEETVTRDDI PGNGTSGHYF
LSRRDVFENS ERVRIEVRDR YHTERVIAVT EKVRYADYSI DYQAGTILFK EPVPSLDQFL
NPVTIVVNYQ ATGPGEERYV YGGRAEIRSE NGSHIGGTAV VEEQARQDNT LFGLDAAWRL
GERLTLKGEG AVSENLEHGR GSAWKTELAA RPVDPLLLNL YYRKVESDFF NTSMTGTELG
TEKYGGRADY RVGADTLVFA ESFLHRFELG DRKLFANHAG MVKKFSLLHL EGGVKVVREE
RDGRTEESDL VYAGVFAPLT KKLDATLRRE QLLSASGVAD YQTKTFAKLD YRLTERTKAF
LTEEYQEGSP LIRQATLFGL ESRLSDRMRL TTGYQMSSGA SGYSQQSNVD LNTRLMEREG
FSLDSRTGYQ IEHALSQQRG QAIVGLNSRY RAAEGLYLNS SLERVQTVQG NTGTRTAFTL
GGEYLRARDL KLSGRYEVRT GPGETASLYG ANAAYKMSPS LTLLGKLSLW DRDADAGDDV
IFDGYLGSAF RPLAGQPLQL LTLARYKVED RRSLPGSFES RSVILSAEPT YRIVSRWSAQ
GKYAGKLSWA DGVGGMMQSY TDLVLAGLSY DLAERWEIAA YLKLMNQYDA RMHSLGAVGS
AGYRVYRNVV LSAGYNFARL DDRDLTGETF QGQGPFVGIK VKFDEDMFES RQAKVIPIPV
PPPAQVAKVP PPAALVPALL VRAERLDEPL LLSGSAELFT LLVNGERAKL PSTEVTLTRE
HLGSLELKGG RFPAPLVFLV SVEQPEQVGS WTLKVMNREG EALRTLEGTG APAKRIPWLG
DTDRRKVEQG EIYQYQLQVT YLDGSIFSTG RELFGVNRRE AVLLTLSGGA FVFDRSELTL
EAKHLLKGAA RVLRARPQEK VIVEGHTDGI GSVEYNMALS QRRCDAAADY LVREEGIAGS
RLLRRWYGKS RPVADNVTTP GRRLNRRVEL KGDFKELHPV SPDDRYRTKS FVVINGRSIP
VDPLGRFDTT FPGNTLDLDL EMGDSQGRFL ATSLPLPDLA VTGPPAETLV GYGTEASGVR
VDADGKGHCM LSGTVEGTSM ELAGRKVPLD EAGRFTLDLP LAEGDQVLGV VLRNGSGCSK
LMNLRLRSER QTMPAARGER
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