| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2661 |
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| Symbol | |
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| ID | 6782658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3080918 |
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| End bp | 3082306 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642768656 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002139465 |
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| Protein GI | 197119038 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.770322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATGG AGAACATCGC AACCTTACCT CTTATGAGCA AGCCCAAGGC CGCCGGGTGG
CTGATCGGGA TTGCCGCGGC GCTACTCGCC GTCGGGTTCA TCTACGGCAA CGTCGGCATC
GTCTTTGCGC TTCTTTTGGC GCTGATGCTG ACCGGGGTGC CGGTCTCCAT CGCGCTCGGC
CTCACCGTTT TGACCTTCCT CTACCTTTTG ACCAACGTAC CGATCGAGGC GGTCGCGCTC
AAGCTGTTTA CCGGGATCGA GAAGTTCGAG ATCATGGCCA TACCCTTCTT CATCCTTGCT
GGCAACTTCC TGACCCATGG CGGGGTGGCG CGCAAGATGA TCGACTTCGC CACCAGCATG
ATCGGGCACC TGCACGGAGG ACTCGCCCTG GCAGGTATCC TCGCCTGCGC CATGTTCGCC
CTTGTCTGCG GGTCGAGCGT TGCCACAGTG GTCGCCATCG GCTCCATCAT CCTGCCGGCG
ATGGTGCGGC ACGGCTACCC CATGCGCTTC GGAGCCGGGG TCATCGTCTG CGCTGGATCT
CTGGGCATCC TCATGCTGCC GTCTATTCCG AAGGTCATCT ACGCCATCTC GACCAACACC
TCTATCGGCG CCCTGTTCGT GGCAGGTCTG TTCCCGGGAA TTCTGCTCAC CATCATGCTC
TGCGTGGTGA CTTGGTACGT GGCGAAGAAG CGCAACTACC CGCGCCTTCC CAAGGCGACC
TGGGCGGAGC GTCTGGTCGC TTTCCGGAAG AGCGTCTGGG GGCTGATGCT GGTGGTCATC
ATCATCGGCG GCATCTACTC CGGCGTCTTT ACTGCAACTG AAGCGGCTGC GATGTCGGCG
GTCTACGCTT TCTTCATCTC GGTCTTCATC TACAAGGACA TGGGGATGAA GGACGTGCCG
CGCGTCCTGC TCAAGTCCGC CAACCTGAGC GCCATGCTGC TGTACATCAT CACCAACGCG
GTGCTGTTCT CGTTCCTGAT GTCCCATGAG AATATTCCCC AAGCGATGGC CGATTGGATC
CTCGGGAAGG ACCTGGGCGT GGTCGCCTTC CTTATCTTCG TGAACCTTGT GCTTTTGCTG
GCCGGCAACG TCATGGAGCC GTCGTCGATC ATCCTCATCT TCGCACCGAT CCTCTTCCCG
GCTGCGATGA AACTTGGCAT CGACCCGGTG CACTTCGGCA TCCTGATCGA CGCCAATATG
GAGGTCGGCC TCTGCCATCC GCCGGTAGGC CTCAACCTGT ACGTCGCCAG CGGCATCTCG
AGGTTGAGTA TCAGTGAGTT GACCATGGCG GTAATGCCAT GGCTCATGAC GATGATCGTC
TTCCTGATCA TCGTCACCTA TTGGCCGTCG CTGTCCATCT GGCTGCCGAA GGTTCTGGGG
ATGATGTAA
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| Protein sequence | MSMENIATLP LMSKPKAAGW LIGIAAALLA VGFIYGNVGI VFALLLALML TGVPVSIALG
LTVLTFLYLL TNVPIEAVAL KLFTGIEKFE IMAIPFFILA GNFLTHGGVA RKMIDFATSM
IGHLHGGLAL AGILACAMFA LVCGSSVATV VAIGSIILPA MVRHGYPMRF GAGVIVCAGS
LGILMLPSIP KVIYAISTNT SIGALFVAGL FPGILLTIML CVVTWYVAKK RNYPRLPKAT
WAERLVAFRK SVWGLMLVVI IIGGIYSGVF TATEAAAMSA VYAFFISVFI YKDMGMKDVP
RVLLKSANLS AMLLYIITNA VLFSFLMSHE NIPQAMADWI LGKDLGVVAF LIFVNLVLLL
AGNVMEPSSI ILIFAPILFP AAMKLGIDPV HFGILIDANM EVGLCHPPVG LNLYVASGIS
RLSISELTMA VMPWLMTMIV FLIIVTYWPS LSIWLPKVLG MM
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