Gene Gbem_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2424 
Symbol 
ID6782422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2811684 
End bp2812859 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content66% 
IMG OID642768421 
Producthypothetical protein 
Protein accessionYP_002139230 
Protein GI197118803 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.481208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCATG AACTGCTGGC GGAGTGCTAC CGCGAGGCGC TGGCGCTTTT GCGGGAAAAT 
TCCACGCCGG CCGGCATCCT TGCCTCGGGG AGGAACCAGA GGTCCGAGGG GCGCAACTAT
ACCAGCATCT TCGGCCGCGA CGCTTCCATC TGCGCTTTGG GGATGGCGGT GTCGGGAGAC
GAGGAGTTGC GGCGCATAGC GGCAGAGGGG CTTCTGACCC TGGCCCGGTA CCAGGCCGGC
AACGGCCAGA TACCGAAGTA CGTGAAGCCG GAGCTGGGGG AGGCTGACTT CTGGTACTCC
GGCTGCATCG ACGCCACCTT GTGGTGGCTC ATCGCCATTC GCTTCGTGGA CCGCGTTCTT
CCCGAAGGTG GGCTTGGAGC GCGGCTCGCC CCTCAGACCG ACCTCGCCCT TTCCTGGCTC
CAGTGCCAGG AACACCAGGT CTGGCGCCTG CTGCAGCAGC TGGACGCAAG CGACTGGGCC
GACATCATGC CGCGGGCGGG TTACGTCCTC TACACCAACG TCCTTTGGTA CTGGACCAAG
ACCCTCTACG GCCTCCCCTG CGCGGCAGAG ACGAAAGAGT ACCTGAACAC GCTCCTTTCC
CCCTTTGGCC GAGTGGTCCC TACACACAAG CGCGCCCGCC TGCTGGTCCA CTACATCCGC
AACCGCTGCA AGCCTTCCCC CTTTTATCTC AGCTTCGTCA ACTTCTCCGA CTGGGGCGAG
GAGATCGACA TCTTCGGAAA CATCATGGCG CACCTGCTCG GGGTGAGCCC CCCCTCCACC
GGCGACAAGG CGGTCGAAGC GATCTTGGCC CTGAAGGCGA ACCAGCCGCA CCCCGTCAGG
GTGGTGGGAG ACCCGATCCG GCCCGGCTCC AGGCTTTGGC GCCCCTACAT GCAGCGCCAC
CGGCAGAACC TCGCCTGGCA GTACCATAAC GGCGGCGCCT GGCCCTTCGT CGGGGGATTC
TGGGTGCTGC TCCTGGCGCG CCTGGGGCGG ACCAGGCAGG CGTGGTCCGA GCTGGAGAAG
CTGGCCCGCT CCAACCGGGT GAACGGTTGG GAATTCAACG AATGGTTCCA GGGGGAGACG
GGCGAGCCTA TGGGCATGCC CCGGCAGTCC TGGAACGCCT CTCTCTACGT CCTCGCCTAC
CGCACCCTCG CCGACGGCAC GCGCTACCTC CCCTGA
 
Protein sequence
MDHELLAECY REALALLREN STPAGILASG RNQRSEGRNY TSIFGRDASI CALGMAVSGD 
EELRRIAAEG LLTLARYQAG NGQIPKYVKP ELGEADFWYS GCIDATLWWL IAIRFVDRVL
PEGGLGARLA PQTDLALSWL QCQEHQVWRL LQQLDASDWA DIMPRAGYVL YTNVLWYWTK
TLYGLPCAAE TKEYLNTLLS PFGRVVPTHK RARLLVHYIR NRCKPSPFYL SFVNFSDWGE
EIDIFGNIMA HLLGVSPPST GDKAVEAILA LKANQPHPVR VVGDPIRPGS RLWRPYMQRH
RQNLAWQYHN GGAWPFVGGF WVLLLARLGR TRQAWSELEK LARSNRVNGW EFNEWFQGET
GEPMGMPRQS WNASLYVLAY RTLADGTRYL P