| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2365 |
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| Symbol | |
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| ID | 6782364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2742755 |
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| End bp | 2743741 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642768364 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_002139173 |
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| Protein GI | 197118746 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGGC ACCGGCGTTA CCCGCGCTTA ATGGCGCTCC TTGTGACAGT CACCGTCCTG
TCCGTCCCCT GTTCTCTCAC CGCCTTTCAG TATCCCTCCC TCACCATCTC CTCCGGGACC
ACCACCGGTT CCTACTATGC CGCCGCCAGC GCCATAGCTA AGGTGTTCAA CCCCAGCAGC
GGCCGAAACG GCGTGAGGCT CGCCACGGTC GCCTCGCCGG GGTCCGTGGC CAACATCGAT
CAGGTCGCCG ACGGCAAGGC CGCTTTCGGC ATCGCCGAGA CCGAGCTTTT GAGGCGGGCC
ACGCAGGGGA TCCGTCCCTG GGAAGGGAAG GCGCGCTCCG GCCTGCGCGC GGTGTTAGGC
CTCTACGTCG AGAGCGTCAC CGTCGTCGCC GCCGTCGACA GCGGCATCAA GCGGGTGAGC
GACCTGAAGG GAAAACGGTT GAATATAGGC GCCCCGGGGT CGATAGACAA CACCTATGCT
AGAGCCTTCC TGCAGATGTC CGGGTTGAAT CCCGGCGAGG TGGTCACCTC GCAGCACTCC
ACCGCCATCG CGCCTGAACT CTTGCAAAAA GGTGATATCG ACGCCTACCT CTGCATCATC
GGCCACCCGA ACCTGACGGT GCTGGAGGCG AGCGCCGGCA AGCGCAAGGT GACCTTGATA
TCCCTGGATG ACGCCCTGAT CCAGCAGGTG GTCAGCCACA ACCCGCTGCT CATGGCCGTC
GCCATACCCA CCAACTTCTA TCCCAACGTC GAAGTGAGCG GCAAGGTCCC CACCATCGGC
CTGCGCGCTG TTCTCTTCAC CTCGGCCGAT CAGCCCGAGG CAAACGTGTA CGCGGTGGTG
CGGGAGGTCA TCTCCAACTT CGACCTGTTC CGCCGCCAGC ATCCCATCCT GCAGGACCTT
TCCCCGCGGG ACGCCGCGAG GGTCGCGGTC ATTCCGCTTC ACCCCGGCGC CCTCCGATAT
TTCAAAGAGG CAGGCCTCGT CCCCTGA
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| Protein sequence | MTRHRRYPRL MALLVTVTVL SVPCSLTAFQ YPSLTISSGT TTGSYYAAAS AIAKVFNPSS
GRNGVRLATV ASPGSVANID QVADGKAAFG IAETELLRRA TQGIRPWEGK ARSGLRAVLG
LYVESVTVVA AVDSGIKRVS DLKGKRLNIG APGSIDNTYA RAFLQMSGLN PGEVVTSQHS
TAIAPELLQK GDIDAYLCII GHPNLTVLEA SAGKRKVTLI SLDDALIQQV VSHNPLLMAV
AIPTNFYPNV EVSGKVPTIG LRAVLFTSAD QPEANVYAVV REVISNFDLF RRQHPILQDL
SPRDAARVAV IPLHPGALRY FKEAGLVP
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